Paraglaciecola sp. T6c: Patl_2168
Help
Entry
Patl_2168 CDS
T00372
Name
(GenBank) 23S rRNA m(5)C-1962 methyltransferase / SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pat03009
]
Patl_2168
Enzymes [BR:
pat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Patl_2168
Ribosome biogenesis [BR:
pat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Patl_2168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
tRNA_U5-meth_tr
Methyltransf_15
PrmA
TRM
DUF6638
Motif
Other DBs
NCBI-ProteinID:
ABG40686
UniProt:
Q15TV2
LinkDB
All DBs
Position
2616159..2617346
Genome browser
AA seq
395 aa
AA seq
DB search
MSSRVTLHPGREKSLLRRHPWIFASAIESTKGRMNLGDTVDVYSHEDVWLGRGAYSPHSQ
IQVRIWTFTQNESVDNGFFQRRIARAQQSREELIERHGLTGYRLIAAESDGLPGVTIDVY
ANVIVCQLLSAGADKHREKIVWALKAQFPEHGIYERSDVAVRKKEGLEEITQVLAGDIPD
EVIIEENGVKIIVNVKQGHKTGFYLDQRDNRAIAAQYAKDRDVLNCFCYTGTFGSYALAA
GACSVTSLDVSDLALETAKRNVDINQLDSSKCEFINHDVFQALRDYKAQSKQFSQIILDP
PKFVDSKASLNRACRGYKDINMLAMQIMAPGGILATFSCSGLMPFDLFQKVVADAALDAG
REVQIIQRLSQAPDHPVSTNYPEGFYLKGLICKVL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacgcgttacacttcaccccggtcgagaaaagtctttattacgtcgtcaccct
tggatatttgccagtgcaattgagagcactaaaggccgaatgaatctcggcgataccgtc
gatgtttatagtcacgaagacgtatggctaggccgcggagcctactcaccacattctcag
atacaagttagaatatggacgtttacgcaaaatgaaagtgtcgacaacggtttttttcaa
cgtcgtatcgcgagagcccaacaatccagagaagagctaattgagcgacatggtttaacc
ggatatcgtttgattgccgcagaatcagatggcctaccaggggtgaccatcgatgtttat
gccaatgttatcgtctgccaactgctctcagcaggggctgataaacatagagaaaaaata
gtatgggcgctaaaagcacaatttcctgagcatggcatatatgagcgaagtgatgtagca
gtgcgcaaaaaagagggattagaagaaatcacccaagtgcttgctggcgacataccggat
gaagtcatcattgaagaaaatggtgtaaaaatcatcgtcaatgtgaaacaaggtcataaa
acgggtttctatttagatcagcgcgataaccgcgctatcgccgctcaatatgccaaagat
cgtgacgtattaaactgcttttgctacacaggcacattcggtagttatgcacttgctgct
ggtgcgtgtagcgttactagtttagatgtatctgaccttgcccttgaaacggctaaacgc
aacgtggatattaaccagctagatagttcaaaatgtgagtttattaatcatgatgtattt
caagcattacgtgattacaaagcacagtctaaacagttttcccaaattatactcgaccca
cccaaattcgtagactctaaggcttcgctaaatagagcgtgtcgtggatataaagatatc
aacatgctggcaatgcagatcatggcccctggcggcattctagccacatttagctgttca
ggtttaatgcccttcgatttgtttcaaaaagtcgtagcggatgctgcattagatgctggc
cgagaagtacaaataatccagcgcttatcacaagcgcctgatcatccggtctcaacaaac
taccctgaggggttttacttgaagggattaatctgcaaagtgctgtga
DBGET
integrated database retrieval system
