Paraglaciecola sp. T6c: Patl_2180
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Entry
Patl_2180 CDS
T00372
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_2180
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_2180
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
MVD-like_N
Motif
Other DBs
NCBI-ProteinID:
ABG40698
LinkDB
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Position
complement(2631132..2633741)
Genome browser
AA seq
869 aa
AA seq
DB search
MNTSLNKLTKSIRYVIATSTAVAVTAISPVYAQQVKDDSAEVEKIAVVGSRSAPRSVADS
PVPIDIIGGDELGKSASTDMLDMLVSTVPSFTARAQPISDAATLIRPVNLRGLSSDSTLV
LVNGKRRHRASVIAFQGGGINDGAQGPDISVIPSSALKQVEVLRDGAAAQYGSDAIAGVM
NFVLKDDADGGSLSVKRGEYYEGDGATTTVEGNVGLPFTKDGYANLSFQLKNADATSRSV
QRPDAANLIAQGNTAVGDPAQIWGNPEINDDISLFGNVGLDLGDDKKFYMFGNYSERDIV
GGFYYRNPHNRGQVYSNDEGETLLVGDVAEAAGAERTCATVAIPKVTLADGTVVDGNVLD
TAAYQQMAADPNCFSMNQIFPGGYTPAFGGNITDTSLVIGVEGELKNGFLSGAFFDLSGS
VGRSESSFNLTNTLNPSLGLDTPTEFDTGKYIQLEKMFNLDLSKQIDVDSIDSLNLAGGL
EWREESFEIVAGEEASWKAGDYASQGFNIGSHGFKGFGPEAQGTNTRRSVAAYIDVEAYI
TEDLLLGAAVRYEDFTTFGDTTNYKLTAQYSVTDELSLRASTSTGFRAPTVGQANVVNTQ
TSIVGGDLIQSFLAPPTDTLSAFYGGKELSPEDSQSYAIGAVYQSGDFFMSADLYSITVE
DRIAQSSKIDVNPDDYEELRTLGVQNPELISAVTYFANDFDTKTQGLDLVANYTHPIFES
GDTKFSLAYNWNETEVEKFNPDTTSVGKVKLLEEGIPHHRATFTVSQSWDTVSAFIRVNY
FGEYFAVHADDAEPGGWNEDAGSSATVDAEVSYFVTDQITLSAGASNLFDNDAQELPASS
FAAVGGQYYESGPFDYNGGFYYVKAKYNF
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtcattaaacaaattaacgaaaagtattcgctacgttattgctacatcgaca
gctgttgcggttaccgcaataagccctgtctatgctcaacaagtaaaagacgatagtgcg
gaggtagaaaaaattgcggtggtagggagccgctcagcacctcgttcagttgcagattct
ccagtgcctatcgatatcatcggcggcgatgagctcggtaagtcagcctccactgacatg
cttgatatgttagtaagtacggttccgtcgtttactgctcgcgcacagcctatttctgat
gccgcaacccttattcgccctgttaacctacgtggtttgtcttcagacagtactctcgta
ttagttaacggtaagcggcgccatcgtgcgtctgttattgcattccaaggtggtggcatt
aatgatggcgctcaaggcccagatatttcagttatccctagttcagcgttaaaacaggtc
gaagtattacgcgacggcgcagctgctcagtatggctctgatgccatagcaggtgtaatg
aactttgttttaaaggatgacgctgacggtggctctctatcggttaaacgcggtgagtac
tacgaaggtgacggcgcaacaaccactgtagaaggtaatgttggtttaccgttcactaaa
gatggttacgctaacctgagttttcagcttaaaaacgccgacgcaaccagtcgcagtgta
cagcgtcccgatgcggctaatctaattgctcaaggtaatactgctgttggtgatccggca
caaatttggggtaaccctgagatcaacgacgacattagcctatttggtaacgtagggctt
gatcttggcgatgacaagaaattctacatgttcggtaactattctgagcgtgatattgtc
ggcggcttttactaccgaaacccccacaaccgtggtcaagtctattcaaatgatgaaggc
gaaacgctattagtcggtgatgtggctgaggccgcaggggcagagcgcacttgtgcaaca
gttgctattcctaaagtgacgctagctgacggaacggttgttgacggaaatgtgttagat
accgctgcctatcaacagatggctgccgatcctaattgcttctcaatgaatcaaattttc
cctggtggttatacacccgcgttcggcggaaacatcactgatacctctttggttattggt
gttgaaggcgaattgaaaaatggtttcttatctggcgcgttcttcgatttgagtggttct
gtcggtcgcagtgaatcatcgtttaacttaacaaatactcttaatccttcgctaggtctt
gataccccaactgagttcgatacgggtaaatatatccagttggagaaaatgttcaattta
gatttatctaagcaaattgacgttgacagcattgattcacttaacttagcaggtggtctt
gaatggcgtgaagagtcatttgaaattgttgcgggtgaagaggcctcttggaaagctggt
gattatgcatcacaagggttcaacattggctctcatggttttaaagggttcggccctgaa
gcacaaggcactaatactcgtcgcagtgtagcggcctatattgacgtagaagcgtatatt
accgaagacttgttgctcggtgctgcggttcgttacgaggactttacgacctttggcgat
accactaactataagttgacggcccagtattccgtcactgatgagctttctttgcgtgca
tcaaccagcactgggtttagagctcctactgtagggcaagcgaatgtggttaatacacaa
acgtctatcgttggcggtgatttgattcaaagtttcttggcgccaccgactgatacattg
tcagcgttttatggcggtaaagagttgtctcctgaagactctcaaagttacgcaattggt
gcggtttatcaaagtggggacttcttcatgagtgctgacttatacagcattaccgttgaa
gatcgtattgcccagtctagtaaaattgacgtaaacccagatgactacgaagaactaaga
acactaggtgtacaaaatcctgagcttatttctgctgttacgtatttcgctaatgacttt
gatactaaaacccaaggtttggatttagtggctaactacacgcatccaatctttgaatct
ggtgataccaagttctcgttagcgtacaactggaatgaaactgaagtcgaaaaattcaat
cctgatacaacgagcgtaggcaaagtaaaattacttgaagaaggaattcctcaccataga
gcgacattcactgtatcgcaaagctgggatacagtgagtgcctttattcgcgttaattat
tttggagagtacttcgccgttcacgctgatgatgctgaaccaggtggctggaatgaggac
gccggcagcagcgcaacggttgacgcagaagtaagttactttgtaaccgaccaaattacc
ttatctgcaggtgctagcaacttgttcgataatgatgctcaggagcttccagctagctcg
tttgcggcagtaggtggtcaatattatgaaagtggacctttcgattacaatggcggtttc
tactacgtaaaagcaaagtataacttctga
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