Paraglaciecola sp. T6c: Patl_2348
Help
Entry
Patl_2348 CDS
T00372
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat03030
DNA replication
pat03430
Mismatch repair
pat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Patl_2348
03430 Mismatch repair
Patl_2348
03440 Homologous recombination
Patl_2348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pat03032
]
Patl_2348
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_2348
Enzymes [BR:
pat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Patl_2348
DNA replication proteins [BR:
pat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Patl_2348
DNA repair and recombination proteins [BR:
pat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Patl_2348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FAN1_HTH
VRR_NUC
Cbl_N2
Motif
Other DBs
NCBI-ProteinID:
ABG40864
LinkDB
All DBs
Position
complement(2857084..2859393)
Genome browser
AA seq
769 aa
AA seq
DB search
MQSPVKSGLILPEKYYLDHFNEFLAYTQTHCAALLLPAHHDFIQRFEQLAHNTQCMFVRV
VNRKGLFIACSTLTYGEIEDCQRELAILTDCGVLRSVVTSDVSPFLDTLNKAQLIELLSS
QQVTFKKSAAKAVLLTLARTLSAEAITQHTLCDDFKVKTFVDEWQYLLFLFFGNLNSALD
KFSMRDLGVLKTRNKSKQQGPRFDGIEEAQSAFYFAQQKQRLGSLCPEGLTEFAQQQELQ
QTPVGITANEYAAHFWYELGCALLAIDCENAKTQALAFWRLSSHQKAQERLIRETYKFDK
ERAKLALEAILDVPKDDELSLFAFDFYQRKFNQAKLSVRTQRLREHSHKLYIDEVYKDRV
ELGVKRYYEGQNLCVDNAAHGGKQQSELQAESLDQTPAQLPANIFAYRTENRLFRALFGL
TFWHELFNEAERATGSEFDRRPRLIKENCLYDELGAQVEARLALFTQCQSQPQPQPQNKH
QINSVSSHAMAYLTQVASRYYGQPNGIFRWHPKMLEIIGVFLRHVNGQWVADHLRAMAKN
YQGLKDGYPDLMVIENQQLRFEEVKAPGDQLRANQLVSIDALQNAGFNVGVCQVEWRYNP
QQPYVVVDVETTGGCKPGHRITEIGAVKVIDSKVVDSWSSLINPERRVPHFITRLTGISN
DMVEDAPLFCEVIDDLEAFMQDCIFVAHNVNFDYGFFKLEYGRLERAFSMPKLCTVREMR
KYYPGSPSYSLGKLSKEYGLSLDNHHRALCDAQAAAELLIMVNEKKHTV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccccgtgaaatcaggtctaatattgcctgagaaatactaccttgatcatttt
aacgagttcctcgcttatacgcagacccattgcgcggcattattattgccagcacatcac
gattttattcagcgctttgagcaattagcgcacaacacccaatgcatgtttgtgcgtgtg
gtaaatcgaaaaggcctgttcatcgcctgcagtaccttaacctacggggaaattgaagac
tgccaacgggagctagcgatactcactgactgtggcgtgttacgttcggttgttaccagc
gatgtcagtccctttctcgatacgctgaacaaggcgcaattgatcgaattattaagctcg
caacaggtaacgtttaaaaaaagtgctgccaaagccgttttattaacgctagcccgtacg
cttagcgctgaggcaatcacccaacataccttatgcgacgatttcaaagtaaaaacattc
gttgatgagtggcaatacttactgtttttattttttggcaatcttaatagcgcgctagac
aagttctccatgcgggacttgggcgtccttaaaacgcgcaataaatctaagcagcaaggc
ccgcgctttgacggtattgaagaagcccaaagtgccttctattttgctcagcaaaaacag
cgtttgggatctctgtgccccgaaggactgactgaatttgcgcaacagcaagaattgcaa
caaacgcccgtggggattacagccaatgaatatgctgcacacttttggtacgagctgggc
tgcgccttattagccattgattgtgagaacgctaaaacacaagcgctggcattttggcgt
ttatcttcacaccaaaaagcacaagagcgcttgatcagagaaacctataaatttgataaa
gagcgcgccaagttggcccttgaagcgatacttgatgtaccgaaagacgacgaactaagt
ttgttcgcgtttgacttttaccaacgtaagttcaatcaagcaaagttaagcgtgcgtacc
cagcgtttacgtgagcacagtcacaaactttacattgatgaagtgtacaaagatcgcgtg
gaattaggcgtaaaacgctactacgaggggcaaaatctatgcgtggataatgctgcgcat
gggggtaaacagcaaagcgagcttcaggctgaatctcttgatcaaaccccagcacaattg
ccggcaaatattttcgcttatagaaccgaaaatcgcttattcagggcactatttggttta
acgttttggcatgaattgtttaatgaggccgagcgcgcaacgggctcagagtttgaccgc
agaccacgcctgataaaagaaaactgtctgtacgatgagttaggtgctcaggtggaagcg
cgcttagcgctgttcactcaatgtcaatctcaaccccagccccagcctcaaaacaaacac
cagataaacagcgtatccagccatgccatggcatacctgacgcaagttgcaagtcgatac
tatggccagcctaacggtatatttcgttggcaccccaagatgcttgagatcattggcgta
ttcttacgacatgtaaacgggcaatgggtagcggaccacttaagagcaatggcgaaaaac
taccaagggttaaaagatggttacccagatttaatggtgattgaaaatcagcaactgcgc
tttgaagaggtgaaagcgccgggggatcaacttcgcgccaatcagctggtgagtatcgac
gcattgcaaaatgccgggtttaacgtcggggtgtgtcaagtagagtggcgttataacccc
caacaaccctatgtcgtggttgacgttgaaacgacaggaggatgcaagccggggcatcgc
attactgaaatcggcgcggttaaagtgattgactccaaggtggtcgacagctggagtagc
cttatcaaccctgaaagacgggtgccgcattttattacccgtttgacggggatcagtaat
gatatggtcgaagacgcgccacttttttgcgaagtcatagatgatttagaggcgtttatg
caagactgtattttcgtggctcacaacgtgaatttcgactatggcttttttaagttggaa
tacgggcgattagaaagagcgttctctatgcctaagctatgcacagtgcgcgaaatgcgt
aagtattatcctggctcaccatcttattcgttgggtaaattaagcaaagaatacggattg
tctcttgataatcatcaccgagccttatgtgatgctcaagctgctgctgagctactgatc
atggtgaacgagaaaaaacacacagtataa
DBGET
integrated database retrieval system
