Paraglaciecola sp. T6c: Patl_2464
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Entry
Patl_2464 CDS
T00372
Name
(GenBank) Tetratricopeptide region
KO
K19804
lipopolysaccharide assembly protein B
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
Patl_2464
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
Zn_ribbon_LapB
TPR_19
TPR_8
TPR_7
TPR_1
TPR_16
TPR_CcmH_CycH
ARM_TT21
ChAPs
TPR_12
ARM_TT21_C
NatA_aux_su
ANAPC3
TPR_9
Ala_racemase_N
SWT1_3rd
NCKAP5
DUF4388
Motif
Other DBs
NCBI-ProteinID:
ABG40980
UniProt:
A0A9J9ER04
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Position
complement(2993515..2994684)
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AA seq
389 aa
AA seq
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MLELLFLLLPVAAGYGWVMGRNSVRQAQRKQSSILSKHYYKGLNFLLSDEPDKAVDTLIK
MINLDSDTVETHIAMGKFFRHRGELDRAIRVHQNLVSKEQISPAQRESALKELGKDYVLA
GFLERAENAFLQLLNSDKHFLDAQQQLFDIYQATKEWGRGIELAENMMENHGDSDELCIR
ISHFYCEQAAIYVRKNELNLAEKTLQKAIMADQNTVRPWLMLGQIAISQEQYQTAIEYLQ
QVPLRDVSWLSEAVPLIEQSAEALGDLEQLEKILNEYWQQCATSYLAKVKLMARQGLTKE
AADVLLDQLRKHPTMKGFKTLMGLYIEQQAPDESMNSLVLLKELVEEQIKQRPKYRCHSC
GFSGGQIHWLCPSCKKWGQVKPIKGLDGE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaactgctttttctgctattacctgtagccgccggatatggctgggtgatgggg
cgcaatagtgtacgtcaagcacagcgtaagcaatctagtattttatctaagcattactat
aaaggcttaaatttcctcttatctgatgagcctgataaggccgtcgatactctcataaaa
atgatcaacctcgacagtgatacggttgaaacccatattgccatgggcaaatttttcaga
caccgaggcgagttagacagagcaatacgcgttcatcaaaatcttgtcagtaaagaacaa
atttctccagcacagcgcgaatctgccctcaaagaattaggcaaggactatgtgcttgca
ggctttttggagcgtgctgagaacgcttttctgcagctattaaattcagacaaacatttt
ctagatgcacaacagcagcttttcgatatctatcaagccaccaaagaatggggcagaggg
attgagctggctgagaatatgatggaaaatcatggcgatagtgacgagctatgcattcgc
atctcgcatttttattgcgagcaagcggctatttatgtacgtaaaaatgaacttaatcta
gccgagaaaaccttgcaaaaagccattatggctgaccaaaataccgttcgcccatggcta
atgctagggcaaatagcgattagccaagagcaatatcagaccgccatcgagtacttacaa
caggtgcctttgcgtgatgtatcttggttgagtgaagcggtgccgttgatagaacaaagc
gctgaagcactgggcgatcttgagcagctagaaaagatccttaacgaatattggcagcaa
tgtgccacctcctatctagccaaagtgaaattaatggcacggcagggtttaacaaaagaa
gcggctgatgttttgcttgatcaactgcgtaaacatcccaccatgaaaggctttaaaacg
cttatggggttgtatattgaacaacaagcccctgatgagtccatgaatagccttgtgcta
ttaaaagagcttgttgaagagcagattaagcagcgacctaaatatcgctgtcatagctgt
ggcttttcgggcgggcaaatacattggttgtgcccatcctgtaaaaaatggggccaggtt
aaaccgattaaaggcttagacggagaataa
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