Paraglaciecola sp. T6c: Patl_2503
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Entry
Patl_2503 CDS
T00372
Name
(GenBank) Exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat03030
DNA replication
pat03430
Mismatch repair
pat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Patl_2503
03430 Mismatch repair
Patl_2503
03440 Homologous recombination
Patl_2503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pat03032
]
Patl_2503
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_2503
Enzymes [BR:
pat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Patl_2503
DNA replication proteins [BR:
pat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Patl_2503
DNA repair and recombination proteins [BR:
pat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Patl_2503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Elong_Iki1
Motif
Other DBs
NCBI-ProteinID:
ABG41019
LinkDB
All DBs
Position
complement(3035655..3036410)
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AA seq
251 aa
AA seq
DB search
MFYLDKKALQDTPNNKPVGKGVNWTGEFAKRHKQAKYPALKQYYAHGTISADTPIAETPL
VALDFETTGLNPKTDSIVSIGLVAMTVKRIRCQEAQHWIIKPDTELKTKSVVIHGITHSD
VADAPSFNRVLDELLQHLQGKVVVAHHKDIEVRFLNSALKHYIGEEIVFPCIDTMALEAR
FSRTIKRTFLRSLLGQKTPSIRLTDCRSRYRLPYYRQHNALTDALACAELLQAQVATHYP
DDTSPISAIWC
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgttttatttagataaaaaagcgctccaggatacgccaaataataaacctgtcggcaaa
ggggttaattggactggtgagtttgctaaacgccataaacaagcaaagtatcctgcgctt
aaacagtattacgcccatgggacaataagtgcagatacccctatcgcagagacccctttg
gtcgcactagattttgaaaccacaggtttaaatcccaaaacggatagtattgtcagtatt
ggtttggtggcaatgacagtgaagcgcatacgttgccaagaggcgcagcactggataatc
aaacccgatactgaattaaaaaccaagtcggtggtgatccacggtattacccactccgat
gtggctgatgcaccgtcattcaacagagttttggatgagctattgcagcacttgcaggga
aaagtggtggtggctcatcacaaagatattgaagtccgttttttaaattcagcgttaaag
cattatatcggtgaggaaattgtattcccgtgtatcgatacaatggctttagaagcgcgc
ttttcccgcactataaaacgtacatttctgcgcagtttgttagggcagaaaacgccgtcc
attcgactcactgattgtcgctctcgctatcgtttgccttattatcgacagcataatgcg
ttaaccgatgcattggcatgtgcagaactgctgcaagcacaagtggcgacacattaccca
gatgacacgtcacccatttctgccatttggtgttag
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