Paraglaciecola sp. T6c: Patl_2804
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Entry
Patl_2804 CDS
T00372
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00061
Fatty acid biosynthesis
pat00071
Fatty acid degradation
pat01100
Metabolic pathways
pat01212
Fatty acid metabolism
pat02024
Quorum sensing
pat04146
Peroxisome
Module
pat_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Patl_2804
00071 Fatty acid degradation
Patl_2804
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Patl_2804
09145 Cellular community - prokaryotes
02024 Quorum sensing
Patl_2804
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pat01004
]
Patl_2804
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pat04147
]
Patl_2804
Enzymes [BR:
pat01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Patl_2804
Lipid biosynthesis proteins [BR:
pat01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Patl_2804
Exosome [BR:
pat04147
]
Exosomal proteins
Exosomal proteins of breast milk
Patl_2804
Exosomal proteins of breast cancer cells
Patl_2804
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABG41315
UniProt:
A0A9J9BBJ6
LinkDB
All DBs
Position
complement(3403450..3405108)
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AA seq
552 aa
AA seq
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MEKSWLKSYDARVPHEINPDSYASIVDILEQAVSTYADSVSYINLGKSITFKELDQQSKQ
FAAYLQHSGLKKGDAVAIMMPNLLQYPVALFGVLRAGMVVVNVNPQYTARELKHQLNDAD
AKAIVIVENFACTLSEVIDDTPVQTVMLTQIGDMLGFPKKWLTNLVVKHVKKMVPAFSLP
SAIHFMDAMKEGASKRYERPTLTGDDIAFLQYTGGTTGVSKGAMLSHRNMVANLEQASAI
LNTVTVPNEELVVTALPLYHIFALQANCLLFLKLGCANLLITNPRDMPAFVSELGKYPFT
VLTGVNTLFNGLLNTPSFTELDFSKVKFSLGGGMAVQRSVAERWYKLTGHVLLEGYGLTE
CSPIVSVNPPQLEQYNGSIGLPLPSTDIRLVDDDGVDVAPGEAGEMLVKGPQVMVGYLNR
PEATEEIMQDGWLATGDIARCDEDGYFYIVDRKKDMILVSGFNVFPNEIEEVAAMHDHIV
EVAAVGIPHEASGEVVKLYAVRREDSLSEQDVIEHCRKHLTGYKVPKKVEFRDELPKSNV
GKILRRELRDEK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaatcctggttaaagagttatgacgctcgagtacctcatgaaatcaatcctgat
agttatgcgtctatcgttgatattttagagcaagcagtatcaacttacgccgatagtgta
agctacatcaatctaggtaaatcaattacctttaaagaactagaccagcaatctaagcag
tttgcagcgtatcttcagcattcagggttaaagaagggcgatgccgtcgccattatgatg
cctaatttattacaatatccagttgccttattcggcgtactacgcgcgggtatggtcgtg
gtaaatgtgaatccgcaatacaccgcgcgcgaactaaaacatcaacttaatgatgcagac
gctaaagccattgtgatcgttgaaaattttgcttgcaccttaagtgaagtgatagacgac
acgccagttcaaacggtcatgttgacccaaattggcgatatgttgggttttccgaaaaag
tggctgactaatctcgtggttaaacatgttaagaagatggtgcctgctttttctttaccg
tcagccatacactttatggacgcgatgaaagaaggggcgagcaaacgttatgagcgccca
accttaactggcgatgacatcgcatttttgcaatacactggcggcacaactggagtgtct
aaaggcgctatgttgagtcacaggaatatggtggcgaacttagagcaagcgtctgctatt
ttaaatactgtcacggtgcccaatgaagagctagtggtcacggcattaccgctttaccat
atctttgctttgcaggcgaactgcctattgttcttaaaattgggctgtgccaacttatta
attaccaaccccagagacatgccggcgtttgtatccgagttgggtaagtatccctttact
gtgctcactggggtaaacacgctatttaatggtttgcttaatacgccaagtttcaccgaa
cttgatttctcaaaggtcaaattctcattgggcggtggtatggcggtacaacgctcagtc
gcagaacgctggtacaagttaacgggacatgtgctacttgaaggatatggtttaaccgaa
tgtagtcctattgtcagtgtgaacccaccgcaattggagcaatacaacggctctattggc
ttgccattaccctctactgatattcgcttagtggatgatgacggcgttgacgttgcgccc
ggtgaagcaggtgagatgctagtaaaaggaccacaagtcatggtcgggtatttaaaccga
cccgaagccactgaagagatcatgcaagatggttggcttgctacaggggatattgcccgc
tgtgatgaagacggatatttctacatagttgatcgcaaaaaagacatgattttagtctct
ggctttaatgttttcccgaatgaaatcgaagaagttgccgcgatgcatgaccatattgtt
gaagtagcagccgtgggcattccccatgaagcgtctggtgaggttgtgaaactttacgca
gtgcgccgtgaagacagtttgtcagagcaagatgttatcgaacattgccgtaaacactta
accggatataaagttccgaaaaaagttgagttcagagacgagcttccaaaatcgaatgtt
ggtaagatactccgcagagaacttcgcgacgagaaataa
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