KEGG   Paraglaciecola sp. T6c: Patl_3030
Entry
Patl_3030         CDS       T00372                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pat  Paraglaciecola sp. T6c
Pathway
pat02020  Two-component system
pat02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pat00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Patl_3030
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Patl_3030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pat03021]
    Patl_3030
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pat02035]
    Patl_3030
Transcription machinery [BR:pat03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Patl_3030
Bacterial motility proteins [BR:pat02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Patl_3030
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 GerE HTH_38 CT_C_D
Other DBs
NCBI-ProteinID: ABG41536
LinkDB
Position
complement(3660567..3661295)
AA seq 242 aa
MNSKAAAYQQLDDRNALVERHAPLVKRIAHHLIARLPASVLVDDLIQAGMIGLLEASRNF
DGTKGASFETFAGIRIRGSMLDEIRKGDWTPRSVHKNGRAITDAINKVERETGRDARDVD
IAKKLEVSIEQYHQMLGEVNAGKIIGMEDLGVSEDVVTTEQTKGSDTPFEDLLQGSFQKA
LAHAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKSKMQTWRI
EE
NT seq 729 nt   +upstreamnt  +downstreamnt
gtgaacagtaaagccgctgcgtatcagcagttagatgacagaaatgcactggtggagcgt
catgctccattggtaaagcgcattgctcatcatcttattgcccgcttacccgccagcgta
ttggtcgacgatctcattcaagccggtatgattggtttacttgaagcgtctcgtaacttc
gatggcaccaaaggtgcgagttttgagacctttgcaggtattcgaattcgcggctctatg
cttgacgaaattcgaaaaggtgattggacaccacgctctgtgcataaaaatggccgtgcg
ataacggatgccattaataaagttgagcgtgagacaggccgtgacgccagagatgtagat
atagccaaaaaacttgaagtcagcattgagcaatatcaccaaatgcttggtgaagtgaat
gcaggtaaaattattggcatggaagatttaggggtatcggaagatgtggtgacaacagag
caaactaaaggctctgatactccgtttgaagatttgctccaaggctcttttcaaaaagcc
ttagcccatgccattacaaccttacctgagcgtgaagcaatcgtattatcattgtactat
gacgaagaattgaatctacgtgaaataggtgaagttctagacgtgagtgaatcacgtgtt
agccaaatacacagtcaagctatgctaaaactaaaaagtaaaatgcagacttggcgtatt
gaagaataa

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