KEGG   Paraglaciecola sp. T6c: Patl_3149
Entry
Patl_3149         CDS       T00372                                 
Name
(GenBank) RNAse III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pat  Paraglaciecola sp. T6c
Pathway
pat03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pat00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Patl_3149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pat03019]
    Patl_3149
   03009 Ribosome biogenesis [BR:pat03009]
    Patl_3149
   03036 Chromosome and associated proteins [BR:pat03036]
    Patl_3149
Enzymes [BR:pat01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Patl_3149
Messenger RNA biogenesis [BR:pat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Patl_3149
Ribosome biogenesis [BR:pat03009]
 Eukaryotic type
  90S particles
   RNase
    Patl_3149
 Prokaryotic type
  rRNA processing factors
   Patl_3149
Chromosome and associated proteins [BR:pat03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Patl_3149
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: ABG41655
LinkDB
Position
complement(3792781..3793464)
AA seq 227 aa
MQLIDPYKPLYTKLGYEFQDPKNLTVALTHRSVGANHNERLEFLGDAVLGLVIAKALFER
FPKQPEGNLTRMRSSLVKGDTLAEVAREFSLGDLLLLGPGELKSGGHRRDSILADAVEAI
IGAIYQEVGMQGCEPLILAWFAKRIDALNPDATPKDDKTRLQEYLQGRQLPLPEYEVIDI
SGKSHDQTFTVQCTVSGLSKPIIGRGKSRRRAEQRTAKQALENLKNV
NT seq 684 nt   +upstreamnt  +downstreamnt
atgcagttgattgacccttacaaacctttatacaccaaactcggttatgagtttcaggac
ccaaaaaacctaacggttgctctcacccatagaagcgtgggtgcgaatcataacgagcgc
ttagaatttttaggtgatgccgtactgggccttgttatcgcaaaagcactttttgagcgt
tttcctaaacagcctgagggcaatttaacgcgaatgcgttccagtttagtcaaaggtgat
actttggcagaagtggccagagagttttccttaggtgacttgctgttacttggcccaggt
gagcttaagagcggcggccatcgtcgagattcaatattggctgatgctgtcgaagctatt
ataggtgctatttatcaagaagtgggcatgcagggctgcgagccattaattttagcttgg
tttgcaaagcgcatcgatgcactcaacccagatgcaacacccaaggatgataagacgcgg
ttacaggaatatttacaaggtcggcagctgcctttacccgaatacgaagtcattgatatt
agcggcaagtcccatgaccagacttttacggtgcaatgcaccgtatcagggttgagcaaa
cctattattggtcgtggaaaaagtagacgtcgcgccgaacagcgcacagcaaagcaagca
ctcgagaatttaaaaaatgtctga

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