Paraglaciecola sp. T6c: Patl_3263
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Entry
Patl_3263 CDS
T00372
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Patl_3263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_3263
DNA repair and recombination proteins [BR:
pat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Patl_3263
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
ABG41769
UniProt:
Q15QR9
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Position
3911681..3914350
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AA seq
889 aa
AA seq
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MPKTNSSAASTNANPSSLQQHTPMMQQYLKIKAEHPDILLFYRMGDFYELFFDDAKKAAE
LLDISLTARGKSGGNAIPMAGVPYHAVENYLARLVKMGQSVAIVEQVGDPATSKGPVERK
VQRIVTPGTVSDEALLNDKQDSILAAVFCPTQKANQELIFGYATLDVTSGRFTLCELSGE
EALAAELQRTNPVELLYPDDFAYSHLINQRKGLRRRPQWEFDLQTATNQLTSQFGTNELS
GFGVQNHQVGICAAGCVMQYIKDTQRSALPHIDRIVLESHNDTVVMDAATRRNLELTFNL
SGGIENTLASILDKTSTPMGSRLLQRWIHRPLTDVTVLKKRQRNIQGLMESPYTQLQSAL
KKIGDMQRVLARLALRSARPRDFARLRQAFALLPDIQHYLEHEISHTSESAQPSDLLHLA
EKISQYPDFADLLERAVIEAPPVLIRDGGVIKEGYNEELDRLRELSKGATDYLEELELRE
KERTGIASLKVGYNRVHGYFIEVSRSQSDLVPVEYVRRQTLKNNERYIIPELKEHEDNVL
SSQSRSLALEKRLYDELFDLLLPQLTQLMQSADALAELDVLTNLAERAESLDYHRPELCP
QSGIHFSQGRHPVVEQVSDAPFIANPINVNPDRRMLVITGPNMGGKSTYMRQTALIVLMA
YIGSYIPAQDAQIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILNNATANSLVLMDE
IGRGTSTYDGLSLAWACAEYLATKLQSFTLFATHYFELTGLADALPELANVHLDAVEHGE
SIRFMHAVQDGAANKSYGLQVAQLAGVPKLVVQAAKRKLHELETGDISKQGRQETSPVNT
VYATEKVETQLDLLSQTSEAEDLLHSIQPDDLTPKQALDYLYQLKKLVR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaacaaattcatcagcagcgtcaacaaacgctaatccctcatctttgcagcag
catacgcctatgatgcagcagtatttgaaaattaaagctgaacatcctgatattctattg
ttttatcgcatgggagatttttatgaattgttctttgacgatgctaaaaaagccgccgaa
ctactcgatatctccctaactgccagggggaaatcaggcggcaatgccatccctatggca
ggcgttccttatcatgcggtagaaaattatttggctcgactagtgaaaatgggccagtca
gtcgctatcgtcgaacaggtgggtgaccccgcaaccagcaaagggcctgttgagcgaaaa
gtgcaacgtattgttaccccaggtacagtatcagacgaggcactccttaatgataaacaa
gacagtatattagccgcagttttttgccccacgcaaaaagcaaatcaagaattgatattc
gggtatgccaccttagatgtaaccagcggtcgctttacgctatgtgagctcagtggtgag
gaagctctcgctgccgagttacaacgcacgaatcctgtcgagcttttataccctgacgat
tttgcctacagtcatcttatcaatcagcgaaagggtttacgccgtcgcccgcagtgggag
ttcgatttacaaaccgccactaaccagcttactagccagtttggtaccaatgagctatct
ggttttggcgtgcaaaaccaccaagtcggtatttgtgctgcaggttgcgtaatgcaatat
atcaaagacacccagcgctcagccctgccccacattgaccgaatagtgcttgaatcccac
aacgacacagtcgtgatggacgccgccacacggcgtaacttagagctaacgtttaattta
tctggtggtattgaaaacacgctcgcgagtattcttgataaaacctcaacgcctatgggc
agtcgtttgttgcaacgatggatccaccgtccgttaacagatgtcaccgtgcttaaaaaa
cgtcaacgaaatattcaagggttgatggagtcaccctatacccagttacaaagtgccctg
aaaaaaataggtgacatgcagcgcgtgttagcaaggcttgcgctgcgcagtgctcgtccg
cgggattttgcccgcctgcgccaagcctttgcactattgccagatatacaacattatctt
gagcacgaaattagtcatactagcgaaagcgctcagccaagcgatttacttcacttggca
gaaaaaatcagtcaataccctgacttcgcagacttgttagaacgtgcagtcattgaagcc
cccccagtattaatccgcgatggtggggtcataaaagaaggttacaacgaagagcttgat
cgcctacgtgaactgtcaaaaggggcgaccgactatttagaagaattagagctacgcgaa
aaagagcgtactggcatcgcgagcctcaaagtgggctacaaccgagtgcatggttacttt
attgaagtcagccgcagtcaatctgacctcgtgcctgtagagtatgttcgtcgccaaacg
ctgaaaaataacgaacgttacattatcccagaactcaaagagcacgaagacaatgtgctt
agcagccaaagtcgctcattagcccttgaaaagcgcttatacgatgagcttttcgattta
ctcttaccgcaattaacacaactaatgcaaagtgctgatgcactagcagaattagatgta
ctcactaatttagccgagcgcgctgaaagccttgattatcaccgcccagaattatgcccc
caaagcggcattcactttagtcaaggtcgccaccctgttgtagagcaggtatcagatgcc
ccctttatcgccaacccaattaacgttaacccagatcgcagaatgttggtgatcaccggc
ccgaacatgggcggtaaatcaacgtacatgcgtcaaaccgccctcatcgtgttgatggcc
tatatcggcagctatatacctgcgcaagatgctcagattggcccgatagaccgcatattt
acccgcattggtgcttccgacgatttagcctctggccgatccaccttcatggtagaaatg
accgaaaccgctaacattttgaacaacgccacggcgaatagcttggtattaatggatgaa
attggccgaggtaccagtacctatgatggcctttctttagcgtgggcctgcgctgagtat
ttagcgaccaagctgcagtctttcaccttatttgctacccattacttcgagttaacaggg
ctagcggatgcattgccagagttagccaatgtgcatctagatgccgttgagcacggtgaa
agcattcgttttatgcacgcagtgcaagatggtgcagccaataaaagctatggtttgcaa
gtagctcaactcgcaggcgtgccgaaattagtggtacaagcggctaaacgcaaattacat
gaacttgaaacgggtgatatttccaaacaaggtcgacaagagacatcgccagtcaataca
gtttatgcaacagaaaaagtagagacgcagctggacttgctcagtcagacaagcgaagcc
gaagacttactgcacagtattcagcccgatgatttaacgcctaagcaggcccttgattac
ttgtaccaactaaaaaaattggttcgataa
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