Paraglaciecola sp. T6c: Patl_3434
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Entry
Patl_3434 CDS
T00372
Name
(GenBank) lipid A ABC exporter family, fused ATPase and inner membrane subunits
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_3434
Transporters [BR:
pat02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Patl_3434
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_21
AAA_22
AAA_16
AAA_5
ABC_ATPase
AAA_29
nSTAND1
MMR_HSR1
AAA_25
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
ABG41940
LinkDB
All DBs
Position
complement(4117046..4118794)
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AA seq
582 aa
AA seq
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MKAVKTLTLMRWLFGQLAPYKTKVMCAISALIVGSGSWLLLGQGVKVVVDEGFVANNATM
LNQMMLVVVGIALLGSIAAYFRFYLMIWLGERVSADIRQSVYSHLLTLPPAFFERTRTGE
VISRFTSDTTVLQSVVGMGLSMALRAGITFIGALLLMLITSPMLTLYVLIAVPIVLLPIR
FFGAKVRLHARNSQDRVADLGAYVDESLHEIHTVQAYSHEDLDRSKFAGRVEDVMTAANS
RIRFRALMMATIMGISMTAITLVAWLGAQQVLTASISAGELTAFMFYAVMAGGAVATLSE
VIGEVQKAAGASERLMELLHTKSEVLEPETPQLLAKKVQGNLTLTDVNFSYPSAVDSPAL
QHISLDIKAGERIALVGPSGAGKSSLFQLLLRFYDIQSGEISLEGVNIAELELESLRQQY
ALVPQESVIFASSVAENIRYGRPDASDEDVQAAAKAARADEFIEQLPEGYQTYLGERGVR
LSGGQKQRISIARAILADRPILLLDEATSSLDAANEQFIKLALDELMREKTTLIIAHRLA
TVINADRIVVMDKGQIVAIGNHQELIASNALYREFAELQLVS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctgtaaaaactcttaccctaatgcgctggttatttggccaactcgcaccctat
aaaacaaaggtaatgtgtgccataagcgcgcttattgttggttcaggctcttggttgtta
ctgggccaaggtgtgaaggtcgtggtcgatgaaggctttgtcgcaaataacgctaccatg
ttaaatcaaatgatgctggtggtggtgggtattgcgctactgggcagtattgcagcgtac
tttcgattttacctaatgatttggctaggagagcgcgtcagcgcagatattcgccaatct
gtgtactctcacctgctaacgttacctcccgcattttttgagagaacacgtaccggcgag
gtcatttcacgctttaccagtgacactaccgtgctgcagtcggtggtgggtatggggctg
tcaatggcactgcgcgcaggcattacttttattggtgcattattgctgatgttaatcacc
agccccatgttgaccctgtacgtattgattgctgtgccaattgtattattgccaattcgt
ttctttggcgccaaagtgcgtttgcatgccagaaacagtcaagaccgagtggcagattta
ggtgcttacgtggatgagtcactgcatgaaattcacaccgttcaagcgtattctcatgaa
gatctcgacagaagtaagtttgccggtcgggtagaagatgtgatgacagcggccaatagc
cgcattcgctttcgtgctttgatgatggccacgattatgggtatcagcatgaccgccatt
accttagtcgcttggttaggtgcgcagcaggtgttaactgccagtattagcgccggtgag
cttaccgcgtttatgttctatgccgttatggcaggcggtgcggtcgccacgttaagcgag
gtcataggggaagttcaaaaagctgccggagccagcgagcgtttaatggagttattgcat
accaagagtgaagtacttgaacctgaaacgccccaattgttagcaaaaaaggtgcaaggc
aacttaaccttaacggatgtgaattttagctatcccagtgctgtagacagccctgcatta
cagcatatctctcttgacataaaagctggcgagcgtattgctttagtcggcccaagcggc
gctggcaaatctagtttattccaactcttgctgcggttttacgatattcaatcgggggaa
attagtttagaaggggtgaatatagctgagctcgagctagagtctttacgccaacaatat
gccctcgtacctcaagagtcagtgatttttgctagcagtgttgccgagaacattcgctac
ggacgaccggatgccagtgatgaagacgtgcaagccgctgctaaagccgccagagccgat
gagtttattgagcagttgccggaaggctatcaaacctatttgggcgagcgaggcgtacgt
ttatctggggggcaaaaacagcgaatctctatcgctagagcaatcctcgctgatcgacct
attttgttgctggacgaagctaccagttcactggatgcagccaatgagcagtttatcaag
ctggctctggacgaactaatgcgcgaaaagaccactttaattattgcccaccgattagcc
acagtaatcaatgcggatcgcatagtcgtgatggataaaggccagatagtggcaataggt
aatcatcaagaattaatcgccagtaatgcgctttatcgggaattcgccgagttgcagttg
gtcagttaa
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