Paraglaciecola sp. T6c: Patl_3443
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Entry
Patl_3443 CDS
T00372
Name
(GenBank) SMC protein-like protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_3443
DNA repair and recombination proteins [BR:
pat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Patl_3443
Archaeal homologous recombinant proteins
Patl_3443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
cobW
nSTAND3
SMC_N
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABG41949
UniProt:
A0A9J9BCE0
LinkDB
All DBs
Position
4132144..4135842
Genome browser
AA seq
1232 aa
AA seq
DB search
MKILSLQFSNLNSLKGQWKIDFRQAPFADNGVFAITGPTGAGKTTLLDAICLALYHETPR
LGALSANNNEIMTRGTAECSAEVEFEVKGMAYRAFWSMRRSHGKPDGKLQAAVVELGDVA
SEKVLASQIKKKSELIEQITGLDFGRFTKSMMLSQGEFAAFLNADEKQRAELLEELTGTE
IYGLISERVHQHYSQAKQQLAELEAQAKGVQLLSEDQKQALMDEQQDLQGQQKERQIHIS
AKQEHVNWWQQLDSAQSAQQQATLQLTQAQHEKEQQKEALQRLANSHPSEALRAPFELLT
DAQAQCINDEKALGQSQQQLQTSDASLAQSKTVSVAVSNEFQAIKATYHAQETLLNEEVI
PLDNEIRQHQDQLTQTNAQHAQLSTKHAQLVQDVENTQTGINSQQQSLKQANDYLTARPS
DEALKQYLGQWQLQAQQIKKEQTSYQQLAEKCKQEQRQLHLAQQDAQLNQQQHEKINQQT
RELENEFQQQTERLSKLEEHGAIDPQERQLSTLQSLTPSLLALKNTQQQWQQQTQELTEK
QTQLADNLAQQKNLSNEREVIKRQYLAKSQQVKLLSQLISQEEQLIHFRAALKDEHPCPL
CGAKEHPLTSEMAVDIPDTVTQKQQQESELAQLEEQGKEIRAKLDAFLRGETELRQRIDW
LSTQQAQLSQTWPEMCQALSPLSDQQTNLQLTIDNADSLIAIENQFNQQIQQLQKQIEKL
KTQARTLLVSKEKWQHSQSQSQSASSALLLAQQSAKNLENSAQNLSNDIQQAGETLTSLS
QSLLTHIQQHGYTPPEADNLLQWLTSKEQDAKQWEHHDNQRNEATVQIDKLTSAQQHQLS
LSGDTKSQLTAIEQQRQTLRAQLESLSTKRFSLFADKSVKTERETLSETLRTLEARHEHA
QQQMRQKEQEHNTHLANVQNAQTQLQQNQTRLKTRQNEWQTKLLASPFADQQAFEAALLD
EATRATLQTLKQTLDDNLAKYQALLEQANTQVKTLLAHNNATQWQLQTRDAVIEALNALT
EEQHKGNKREGEISQALNFDKQRSSEQQSLFSQIELQRNEFEHIHYLHSLIGSQKGDKFR
TFAQGLTLDNLMYLANKQLERLHGRYLLKRKADASLALSVIDTWQGDIQRDTKTLSGGES
FLVSLALALALSELVSHKTSIDSLFLDEGFGTLDSETLDIALDALDNLHASGKMIGVISH
VEAMKERIVAQLAVTKKSGLGVSELDQRYAVR
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacttagcctgcaatttagcaacctcaactcattaaaaggccaatggaaaata
gactttcgccaagcgccttttgccgataacggtgtgttcgctatcacgggccctactggg
gcaggcaaaaccaccttgctggatgccatctgcttagcgctctaccatgaaaccccgcgc
ttaggggcgctgtcggccaataacaacgagatcatgacccgaggcacagccgagtgcagt
gccgaagttgagtttgaagtaaaaggcatggcctatcgcgccttttggagtatgcgccgc
tcacacggcaagccagacggtaagctgcaagcggcggtggtggagctaggggacgttgcc
tcagaaaaagtgctggctagccaaattaagaaaaagtcagagctgatagagcaaatcacc
gggcttgattttggtcgttttactaaatccatgatgctctctcaaggggagtttgcggcg
tttttaaatgccgatgaaaagcagcgcgccgagctattagaagaactcacaggcactgaa
atttacggcttgatctctgaacgcgtacaccaacattacagccaagcgaaacaacagtta
gccgagcttgaagcccaagccaaaggggtacagttgctcagcgaagatcaaaagcaagcc
ttaatggatgaacagcaagacttacaagggcagcaaaaagagcgccaaatacacataagt
gctaaacaagagcatgtgaactggtggcaacaacttgactccgctcaaagtgcacaacag
caagccacactgcagctgacccaagctcaacacgaaaaagagcagcaaaaagaggcctta
caacgactggccaacagccacccgagtgaagcgctgcgagcgccgtttgagttattaacc
gacgctcaagcccagtgcattaacgacgaaaaggccttgggtcaaagccagcagcaactg
caaacaagtgacgctagcttagcgcaaagtaaaaccgtaagtgtggcagtgagtaatgaa
tttcaggcaatcaaagcgacataccacgcacaagaaaccttgctcaacgaagaggttatt
cccctagataacgaaatacgtcaacaccaggaccagctcacccaaaccaacgcgcaacac
gctcagttgagtacaaagcatgcacagcttgtgcaagatgttgaaaacacccagacgggg
attaatagtcagcagcaatcgttaaaacaagccaatgactacttaaccgctcgtccctct
gatgaagcactgaaacagtatttaggtcaatggcagttgcaagcgcaacaaatcaaaaaa
gaacaaacgagttatcagcaactggctgaaaagtgtaaacaggaacaaaggcaattacac
ctagcccagcaagacgctcagcttaaccagcagcaacatgaaaaaatcaatcaacaaacc
cgtgaattggaaaacgagtttcagcaacaaaccgagcgtttatctaagcttgaagagcat
ggcgcgattgacccccaagagcggcagctcagtacattacaaagcttaacgccgtcacta
ttggcgttaaaaaacactcagcaacaatggcaacagcaaacccaagagctaaccgaaaaa
cagactcagctcgctgataacctagcgcaacaaaaaaacctgagcaatgaacgagaagtt
ataaaacgtcagtatttggcaaaaagccagcaagtgaaactgcttagccaacttatcagc
caagaagagcagttaattcactttcgcgcagccctaaaagatgaacacccctgccctttg
tgcggcgccaaagagcacccgctgacatctgaaatggcggtggatattcctgataccgtt
acgcaaaaacaacaacaggaaagcgaactggctcagttagaagagcaaggtaaagaaata
cgcgcaaaactagatgccttcctgcgcggtgaaaccgagctgagacaacgtatcgattgg
ctcagtacccaacaagcacaattaagccaaacatggcctgagatgtgccaagccctaagc
ccgttatctgatcaacaaactaacctgcaacttactattgataatgctgactcgcttatt
gccattgaaaatcaatttaaccagcaaattcagcagttacaaaagcagatagaaaagtta
aaaacgcaagctcgcactttgttagtcagcaaggaaaaatggcaacacagtcaaagccag
agtcaaagtgccagctcagccttattgctggcgcagcagtcagcgaaaaacctagaaaac
agtgcgcaaaatcttagcaacgatatacaacaggccggtgagacattaacttcattgagc
caaagcttgttaacgcatattcagcaacacggctatacaccacccgaggcagataatctg
cttcaatggctaacgagcaaagaacaagacgccaagcagtgggaacaccacgacaatcag
cgcaatgaggcgacggtgcaaatagacaaactcaccagcgcccagcaacatcagcttagc
ctatcaggcgacaccaagagtcagctaaccgctattgagcagcaacgccaaacgttacgc
gcacaacttgagagcctaagtactaaacgctttagcttgtttgctgataagtcggttaaa
acagagcgcgagacattaagcgaaacgctgcgcactttagaagcgcgccacgaacacgct
cagcagcaaatgcgccaaaaagagcaggaacacaatacccatttggctaacgtacaaaac
gcccaaacccagttgcaacaaaaccaaacccgcctcaaaacgcggcaaaacgaatggcaa
accaagctcctagccagcccctttgccgaccagcaagcctttgaagccgccttacttgat
gaagccacccgtgcgacattacaaacactcaaacaaaccttggatgacaacctagcaaaa
tatcaggctttgcttgagcaagctaacacccaagtcaaaacgctgttggcacacaacaat
gccacccagtggcaactacaaacgcgcgatgcggttattgaagccttaaatgccctgact
gaagagcaacacaaggggaacaagcgtgaaggtgaaatcagccaagcgttgaatttcgat
aaacagcgcagcagcgaacaacaaagtctatttagccaaattgaattacagcgaaatgaa
tttgaacatattcattacctgcattcgttaattggctcgcaaaaaggggataagtttcgt
acgtttgcccaaggcctcacccttgataatttgatgtacctggccaataaacaactagag
cgcttgcacggccgatatttactcaagcgcaaagccgatgccagtttagccctaagcgtg
attgatacctggcaaggggatattcagcgcgacactaagaccctcagcggcggcgaaagc
ttcttggtcagcctagcactggcactggcgctatcagaactggtcagtcacaagaccagc
atcgactctttgtttttagacgaaggttttggcaccctagacagtgaaacactggatatt
gccttggatgcactggataacctgcacgcctcgggcaaaatgattggggttatcagtcat
gttgaagccatgaaagagcgcatcgtagcgcaattggcagtgaccaagaaaagtggatta
ggggtgagtgagttggatcagcggtacgctgtgcgttaa
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integrated database retrieval system
