Paraglaciecola sp. T6c: Patl_3564
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Entry
Patl_3564 CDS
T00372
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Patl_3564
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pat01007
]
Patl_3564
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pat03016
]
Patl_3564
Enzymes [BR:
pat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Patl_3564
Amino acid related enzymes [BR:
pat01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Patl_3564
Transfer RNA biogenesis [BR:
pat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Patl_3564
Prokaryotic type
Patl_3564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
ABG42066
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All DBs
Position
4283833..4286598
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AA seq
921 aa
AA seq
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MDKTFSPQNIEQQCYQAWEDKGYFKASGEGQPYCILLPPPNVTGSLHMGHGFQQTIMDTL
TRYHRMKGDNTLWQCGTDHAGIATQMVVERQLNAQGKTRHDLGREAFVEKIWDWKKESGG
NITQQMRRLGTSPDWDREVFTMDDDLSEAVNEVFVRLHEEGLIYRGKRLVNWDPVLHTAV
SDLEVLSEEENGFMWHMRYPLADGTGELIVATTRPETMLGDTAVAVHPDDERYQGFIGKQ
IKLPITGRLIPIIADDYVEQDFGTGCVKITPAHDFNDYDMGKRHNLEMINILTDDAKIND
VAPEQYRGLDRFDARKQIVADLDAAGVLVKIEDHKLKVPRGDRSGSVIEPYLTDQWYVAV
QELAKPAIDAVKSGEIKFVPENWDKTYYQWMNNIQDWCISRQLWWGHRIPAWYDENGKIY
VGRTEAEVREKNGLDASVTLRQDEDVLDTWFSSALWPFATMGWPKKTPELDTFVPSAVLV
TGFDIIFFWVARMIMMTKKFTGQIPFKEIYITGLIRDEQGDKMSKSKGNVIDPIDLIDGI
SIDDLVAKRTSGMMQPKLAAKIEKNTRKSYPEGFAAYGTDALRFTFAAMASTSRDISFDV
KRVEGYRNFCNKLWNASRFVMMNAEDQDTGANGGDMELSLADKWILARFQQTLKDFEDAL
TGYRFDIAANLVYEFTWNQFCDWYLELSKPVLNSEVSTDAQKRGTRHTLVNVLESILRLA
HPIMPFITEEIWQRLAPLCGIQADSIMTQPFPAQSEALRDEDTLAEMEWIKSVIVGIRNI
RGEMDISPNKPLNVLLRNASAQDWQRLQSSREFLGALAKLESVELLQPEEEAPASATALV
GEMEILIPMAGLIDKDAELARINRALAKIEADFGRTQGKLSNEKFVSNAPPAVIDKEKAK
LDDFTMQMTKLKEQKQTIENL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacatttagcccacaaaacattgaacagcaatgctaccaagcgtgggaagat
aaaggctattttaaagccagcggcgaaggccaaccttactgcatattactaccgcccccc
aacgtgactggcagcttacacatgggccatggttttcaacaaaccatcatggatacgcta
actcgttatcaccgtatgaagggtgacaataccttatggcaatgcggtaccgaccacgcg
ggcattgccacgcagatggtggtagaacgtcagttaaacgcccaaggtaaaacccgtcac
gacttaggtcgtgaagcgttcgttgaaaaaatttgggactggaagaaagaatctggtggc
aacataacccaacagatgcgccgtttaggtacgtcacccgattgggatcgtgaagtattc
accatggatgacgacttatcggaagccgtgaacgaagtatttgttcgcttgcacgaagaa
ggcctgatttaccgcggcaaacgcttagtcaactgggatccggtattgcacactgcggta
tcagatttagaagtacttagcgaagaagaaaatggcttcatgtggcatatgcgctaccca
ttagccgatggcacaggtgagctgattgtcgccaccacgcgccccgaaaccatgctgggt
gacacagccgttgcggttcaccctgatgatgagcgttaccaaggctttatcggtaagcaa
atcaagctgccgattacaggccgtcttattccgatcatcgcagatgactacgttgagcaa
gacttcggtactggctgcgtaaaaattacccctgcccatgatttcaacgattacgacatg
ggtaaacgtcataacctagagatgataaacattctcaccgatgacgccaaaattaacgat
gttgcccctgagcaataccgtggccttgaccgctttgatgcacgtaagcaaatcgtcgct
gatttagacgccgcaggcgtattggttaagattgaagaccacaaattaaaagtgccccga
ggcgatcgctctggctcggttatcgaaccttatttaaccgatcagtggtatgtggcagtt
caagagctagcgaaacccgcaattgatgccgtgaaaagtggcgagattaaattcgttcct
gaaaactgggacaaaacctattaccagtggatgaacaacattcaagactggtgtatttca
cgccaactttggtggggtcatcgcatacctgcttggtatgacgaaaatggcaaaatctac
gttggccgcacagaagctgaagtacgcgaaaagaacggccttgatgccagcgtcacattg
cgccaagacgaagacgtgttagatacgtggttctcttctgccctatggccatttgctact
atgggctggccaaagaaaaccccagagcttgatacttttgtacctagcgccgtattggtt
accggtttcgatattattttcttctgggtagccagaatgatcatgatgaccaagaaattc
actgggcaaattccgtttaaagaaatttatatcaccgggcttatccgcgacgagcaaggc
gataaaatgtctaaatcgaaaggcaatgttatcgaccctatcgatttgattgacggtatc
agtattgatgacttagtcgccaagcgcacctcaggcatgatgcaacctaaactagccgct
aaaatcgaaaagaatacccgcaagagctacccagaaggctttgctgcttatggcaccgat
gcattgcgctttacgtttgctgcgatggcgtctaccagtcgcgacatcagctttgatgtg
aagcgagttgaaggctatcgcaacttctgtaacaagttatggaacgcatcgcgttttgtg
atgatgaacgctgaagaccaagacactggcgcaaatggcggcgacatggagcttagccta
gcggataagtggattttggcgcgcttccagcaaaccttgaaagactttgaagatgcctta
acgggttatcgtttcgatattgcagcgaacttggtgtacgagttcacttggaatcaattc
tgtgattggtacttagagctatcgaagccggtacttaactctgaagtgagcactgacgcg
caaaaacgcggtacccgccatacattggtcaatgtacttgaaagcattttgcgtttagcg
catccgattatgccgtttatcacagaagagatatggcagaggttggcgccgctatgcggc
attcaagccgacagcatcatgactcagccattcccagcacaaagcgaagcgctgcgcgac
gaagacacactggctgaaatggagtggatcaaaagcgtgattgtgggcattcgtaatatt
cgcggcgaaatggatatctcacctaataaaccgttaaatgtgttgcttcgtaacgccagt
gctcaagattggcaacgtttgcaaagcagccgtgagtttttaggggcgctagccaaactt
gaaagcgttgaattgttgcagccagaagaagaagcccctgccagtgctaccgcgctagta
ggtgagatggagattcttattcctatggctgggctaatagataaagacgcagaactggcc
cggattaaccgtgcgttagcaaaaattgaagctgactttggccgtactcaaggtaaattg
agcaacgaaaaattcgttagcaatgcaccaccagcggtcattgataaagaaaaagccaag
cttgatgacttcaccatgcaaatgacgaagttgaaagagcagaaacaaaccattgaaaat
ttgtaa
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