Paraglaciecola sp. T6c: Patl_3811
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Entry
Patl_3811 CDS
T00372
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00061
Fatty acid biosynthesis
pat00071
Fatty acid degradation
pat01100
Metabolic pathways
pat01212
Fatty acid metabolism
pat02024
Quorum sensing
pat04146
Peroxisome
Module
pat_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Patl_3811
00071 Fatty acid degradation
Patl_3811
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Patl_3811
09145 Cellular community - prokaryotes
02024 Quorum sensing
Patl_3811
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pat01004
]
Patl_3811
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pat04147
]
Patl_3811
Enzymes [BR:
pat01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Patl_3811
Lipid biosynthesis proteins [BR:
pat01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Patl_3811
Exosome [BR:
pat04147
]
Exosomal proteins
Exosomal proteins of breast milk
Patl_3811
Exosomal proteins of breast cancer cells
Patl_3811
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
DUF4347
Motif
Other DBs
NCBI-ProteinID:
ABG42311
UniProt:
A0A9J9BCV5
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All DBs
Position
complement(4596675..4598318)
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AA seq
547 aa
AA seq
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MDNTTVLHSLFAGNEAHPDKPMFHQPIDRQWHTYTWAEVTEQAKRIAQGLRAQGFEKGDR
IVIMSKNCAEWIIADFAIAMAGMVSVPIYATAGVNIIEHVINHSGAKAIFVGKLDNLDAA
KAAIPSTLLSISFPYPTVECHEKWNDWLTAFEPIEDPYLPSHDDLATISYTSGTTSLPKG
VVLSHKNFSSAADNVIELFEIRDGDRSISYLPLAHITERSLVAVFVRCKVEVYFTENLQT
FVADIQHASPTGFSSVPRLWSVFQAQVISQVGAEKLDKMLKLPIIGKLVASKIRKKLGLH
KARTFGSGAAPMSESVLAWYHRLGIPINEGWGMTETTGLASGNMPFSHEDLGTIGKPMPN
IEMTLSPDSEILIRGDLVFNEYYNDPEATAENFVDGWFRTGDVATITETGAYKITGRIKE
QFKTAKGKYVMPVPIESLLFANLNVEQACVLGAGQKQPVAMVVLNQSCKRKSSEVIKSLQ
DTLAKVNSQLESHQKLDFIMVCSHGWTVENDLLTATTKVKRSDVERHYSWLFDEDRGEGI
LWEEDLH
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggacaatacaacggtactgcatagcttatttgcaggtaacgaagcgcaccctgataag
cccatgttccatcaaccaatcgaccgccaatggcatacctacacatgggccgaagtgact
gagcaggccaagcgcattgctcaaggcttacgcgctcaaggtttcgaaaaaggcgatcgt
attgtcattatgtcgaaaaactgtgctgagtggatcatcgctgacttcgccattgctatg
gcggggatggtcagtgtgccgatttatgccaccgcaggggtgaatattatcgagcacgtg
attaatcacagcggcgcaaaagcgatattcgtggggaaattggataatctcgatgcagcc
aaagcggcgattcctagtacgttattgagtatatcttttccttaccccacggttgaatgc
catgaaaagtggaatgattggctaacagcatttgaacctattgaggatccatatctgcca
agtcatgacgatttggcgacgatttcttacacgtcgggcaccacgtctttgccaaaaggg
gtggtattgagtcataaaaacttctcttctgcggcggacaacgtcatcgagctctttgag
attagagacggtgatcgctcaatcagttatttgcctttggcgcatattaccgagcgcagc
ttagtggcggtatttgtgcgctgtaaagtcgaggtgtattttactgaaaacctacaaaca
ttcgtggctgatattcagcacgcgagccctacagggttctcgtcggtgccacgcttatgg
tcggtatttcaggctcaggtcatcagccaagtaggcgctgaaaagctagataaaatgctt
aaattgccaattattggcaaattggtcgccagtaaaattcgcaaaaaactcgggttacac
aaggcccgcacctttggctcaggtgctgcgcctatgtccgaatctgttttggcctggtat
caccgtctgggtattccaatcaacgaagggtggggtatgacggaaactacaggtcttgcc
agcggcaatatgccttttagccatgaagacttgggcacaattggcaaacctatgcccaat
attgaaatgaccctctctcctgacagtgaaattctgatccgcggtgatttggtgtttaac
gaatactataacgacccagaagccacagcagagaacttcgttgacggttggtttagaacg
ggcgatgtggcgaccattacagagacaggtgcctacaaaatcacggggcgcattaaagag
cagtttaagacagcaaaaggcaagtatgtgatgccagtgccgattgaaagcctgcttttt
gctaacttaaatgtggagcaagcgtgtgtgcttggagcaggacaaaagcaaccagtggcc
atggtggtgcttaatcagtcgtgcaagcgtaaatcaagtgaagtgattaaatctctgcaa
gacacgctagcaaaagtgaacagtcagttagaaagtcatcaaaaactcgatttcattatg
gtgtgtagccatggttggacagtagagaacgatttactgacagccaccactaaggttaag
cgcagtgatgtagagcgccactatagttggttatttgatgaagaccgtggtgagggcata
ctatgggaagaagacttgcactag
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