Paraglaciecola sp. T6c: Patl_3830
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Entry
Patl_3830 CDS
T00372
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pat03021
]
Patl_3830
Transcription machinery [BR:
pat03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Patl_3830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
GIT_CC
Motif
Other DBs
NCBI-ProteinID:
ABG42330
LinkDB
All DBs
Position
4623847..4626678
Genome browser
AA seq
943 aa
AA seq
DB search
MAQKHSFALGQRWLSDTQTELGLGTVVSVDNRAVSLLFPATGDSRVYAKQSAPLTRITFG
EGDNITSHEGWDMKITNVSEHNEMLTYTGIRHDTEEEVLLKETFIDHHFQLNQPEKRLFA
GQFDHPKWFDLREQCLNHQYSHSTSSLLGFVGARVDLIPHQLHIAAEVGRRFAPRVLLAD
EVGLGKTIEAALIIHQQLLTARAERVLIVVPSSLVHQWLVEMLRRVNLAFSIFDEERCSA
MAGESGNPFESEQLVICSLDFLTHNSSYYELAMQAPWDLMVVDEAHHLIWSEGQPSQEYQ
VVQGLAQVTKGVLLLTATPDQLGHESHFARLRLLDPARFHDYHSFVKEEQQYSTLAQAIS
PLMSGDALSADNIAAIEAFAKDEDLGDINAMSARQKTQLLHNLLDRHGTGRLLFRNSRAG
VSGFPDRKLYSYSLEQPEEYIAAQDEDPTNLSLHLTPERNPDMVNSWFNIDPRVDWFIDK
LQELKGEKVLTICANAGTALQLAEVLRVKAGTRATVFHEGMGIVERDKAANYFAQTEEGA
QVLICSEIGSEGRNFQFAHHLVLFDLPQVPDLLEQRIGRLDRIGQTHDVCIHVPYFDMSA
QQVLLDWYHQGLNAFEHTCPTGMTVYEETQELLHSCLMFPTDFAASENLINQTASLHRQL
KERLEQGRDKLLELNSSGKGRVEKLQKEILAAEDSPTLELFMTRLFDTLGLAQEDKDESC
YILRPTETMVATLPGLDEEGMTITYERTTATRLEHVNFFSWDHPMVQHAMETVTTEITGK
SSVALGEDKSLPAGAYWLECLFVLSGKAEKSLQLDRFLPPTPIKICVDTTNSVVEKQFTK
LDKVRGKMGNQLIKALTPQLTKALAVAQSQGEADAEKVRKQCQKQMKSLLGGELKRMQSL
QKVNPSIRDEEIAHLQQQIDDLKLVISEARVNLEAIRLIVNNP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaaacactcattcgcacttggtcaacgttggttaagcgatacccaaacagaa
ctcggcttagggactgtggtatccgttgataatcgcgctgtcagtttgttattccctgcc
acgggagacagtcgagtgtatgccaagcaaagtgctccactaacccgcattacatttggt
gagggcgacaacattaccagccacgaaggttgggatatgaagatcactaacgttagtgaa
cataacgaaatgttgacctataccggtattcgccatgacaccgaagaagaagtgttgttg
aaagaaacttttattgatcatcattttcagctaaaccagccagaaaaacgcttgtttgca
gggcaatttgaccaccccaagtggtttgatttacgcgagcaatgtttgaatcaccaatat
agccacagtacgtcatcattattgggctttgtgggagctcgggttgacttgatccctcac
caattgcacatagcagcagaagtgggccgtcgttttgcacctcgagtgttacttgctgat
gaagtaggtctaggtaaaaccattgaagctgcgttgattatccatcagcaattgctaact
gcccgtgctgaacgcgtattaattgtagtgccttcaagcttggtgcatcaatggttggtc
gagatgctgcgccgggtgaacctcgcgttttccattttcgatgaagagcgctgcagcgcc
atggctggtgaaagtggtaacccgttcgaatctgagcagctggttatttgtagtttagac
tttttaacccacaacagcagctattacgagttagccatgcaagctccatgggatttaatg
gtggttgatgaagcccatcacctgatttggagtgaaggccagccgtctcaagagtaccaa
gtggtgcaaggtttagcccaagtcaccaaaggggtgttactgttaaccgccacgcctgac
caacttggccatgaaagtcactttgcacggctgcgcttgctcgacccagctcgctttcac
gattaccacagcttcgtaaaagaagagcagcaatacagtactttggctcaagctatttct
cctttgatgtcaggtgatgccttaagcgcggataacattgccgctattgaagccttcgct
aaagacgaagatctaggtgacatcaatgctatgtctgctaggcaaaaaacgcagttacta
cataatttactcgacagacacggtacaggccgtttgcttttcagaaacagccgcgctggc
gtcagtggcttccctgatcgtaaattgtatagctacagcctagaacagccagaagagtat
attgccgctcaagatgaagatccaaccaacttgtcgttgcatttaacaccagagcgcaac
ccagatatggtcaacagctggttcaatatcgacccaagagtggactggtttattgataaa
ctacaagagcttaaaggcgagaaagttctcactatttgtgccaacgcagggaccgcattg
cagttagctgaggtactgcgggtaaaagccggtactcgggcaacagtgttccatgaaggc
atgggcatagtagagcgcgacaaagccgcaaactactttgcacaaaccgaagaaggcgcg
caggtgttaatttgcagtgaaatcggcagtgaagggcgtaactttcaatttgctcaccac
ttggtgttatttgatttaccccaagtaccagatttgcttgagcagcgtatcggtcgtctt
gatcgtatcggtcaaacccacgatgtgtgcattcatgtgccttattttgatatgagcgcc
caacaagtactacttgactggtatcaccagggtctgaatgcgtttgagcatacttgccct
acaggcatgactgtgtacgaggaaacccaagagttactgcatagctgcttgatgttccca
accgactttgccgcgagcgagaacttaattaaccaaaccgcaagtttgcacagacaactc
aaagagcggttagaacaagggcgtgacaaactgcttgagcttaactcgtcaggtaaaggc
cgagtggaaaagctgcaaaaagaaatactcgccgcagaagactcacccacccttgagctg
ttcatgacacgcttatttgacacccttggccttgcccaagaggataaagacgaaagttgt
tatatccttcggcccactgaaaccatggtagcgaccttacccggcctagatgaagaaggc
atgaccattacctacgaacgcaccaccgcgacccgtttggagcatgtgaacttctttagc
tgggaccaccccatggtgcaacatgccatggagaccgtcactacagagatcacaggtaag
agctcggtagcattgggagaggataaatccttacccgctggcgcatactggctagagtgc
ttgtttgtgttatcgggtaaagctgaaaaatcattgcaacttgaccgcttcttgcccccc
acgcctataaaaatttgtgttgataccactaacagtgtggttgaaaaacaatttactaag
ctggacaaagtacgcggtaaaatgggtaatcaattgattaaagcgttgacgcctcaatta
accaaagctttagctgtagcgcaaagtcaaggtgaagctgacgcggaaaaagtccgcaag
cagtgtcaaaagcaaatgaaatccttgctgggcggtgagctaaaacgtatgcaaagctta
cagaaagtgaacccgtcaattcgcgatgaagaaattgctcacctgcagcaacaaatcgac
gacttgaaactggttattagcgaagcacgggtgaatcttgaagccattagactgatagtg
aacaacccctag
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