Paraglaciecola sp. T6c: Patl_3859
Help
Entry
Patl_3859 CDS
T00372
Name
(GenBank) Pseudouridylate synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pat03016
]
Patl_3859
Enzymes [BR:
pat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Patl_3859
Transfer RNA biogenesis [BR:
pat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Patl_3859
Prokaryotic type
Patl_3859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABG42359
UniProt:
Q15P29
LinkDB
All DBs
Position
4654399..4655451
Genome browser
AA seq
350 aa
AA seq
DB search
MQINHWQYLSSKPESTGIFKQQPDDFVVQEILGYEPVGEGEHIYLWVRKEGLNTAYLAEQ
IAKFAQLPLRAVTYAGRKDKHSVSEQWFGVHKPGKAEYDWSALNVPGATVLKAIRHNKKL
RTGVLKGNKFTILMRDVTPSDDLAQRIAQVSLSGAPNYYGPQRFGDSRYDPKGSNLMLAE
KMINGEVIRNRNKRSMAISALRSWLFNEVLSERINAGDFAQPLEGDVMSLAGNASYFVSD
DIDDTIKQRLATRDITISAPLWGKGELASTGSALAFEKSVVMNHPKITKTLASLGLEQER
RPIVLYPSNLTWAWEQNNLRIAFELPAGTFATSVLREILNVESVDTGPSE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaccattggcagtacctaagtagcaagcccgaatcaactggcatattcaaa
cagcaacctgatgattttgtggtgcaagaaattctcggttatgagcctgtcggggaaggc
gaacatatttatctgtgggtacgaaaagaaggcttaaataccgcttatttggcggagcag
atcgctaagtttgcgcagctaccattgcgcgcggttacctacgctgggcgcaaagacaaa
cactcagttagcgagcaatggtttggtgtgcacaaacccggtaaagcagaatatgattgg
tcggcgcttaatgtaccgggtgccaccgtactcaaagctattcgtcacaataaaaagcta
cgaactggtgtattaaaaggtaataagtttactattttgatgcgcgacgttacccccagc
gacgacttagcacaacgcattgcgcaagtgagcctgtcaggtgcccctaattactatggc
ccccaaagatttggtgatagccgctatgatcccaagggcagtaatttgatgcttgctgaa
aaaatgattaacggtgaagttattcgcaaccgtaataagcgctcaatggctatctcggca
ttacgttcttggttatttaacgaggtactgagcgaacgtatcaatgcaggggattttgcc
cagcccttagaaggcgatgtaatgtctttagcgggcaacgcaagctattttgttagcgat
gatatcgacgataccatcaagcaacgcttagccacacgagacataaccatatctgcacct
ttgtggggtaaaggcgagcttgcgtccaccggctcagcattagcatttgaaaaaagcgtt
gtcatgaaccaccccaagataacgaaaacgttagccagtctaggcttggagcaagaaaga
cgtcctattgttttatacccaagcaacctgacatgggcgtgggagcaaaataatctgcgc
attgcgtttgaattacccgccggcacatttgccacgtcagttttgcgagaaattttaaat
gtcgaatctgtcgatacggggcccagcgaatga
DBGET
integrated database retrieval system
