Paraglaciecola sp. T6c: Patl_3875
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Entry
Patl_3875 CDS
T00372
Name
(GenBank) DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada / DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Patl_3875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pat03000
]
Patl_3875
03400 DNA repair and recombination proteins [BR:
pat03400
]
Patl_3875
Enzymes [BR:
pat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Patl_3875
Transcription factors [BR:
pat03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Patl_3875
DNA repair and recombination proteins [BR:
pat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Patl_3875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABG42375
UniProt:
A0A9J9ERX7
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Position
4670287..4671660
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AA seq
457 aa
AA seq
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MLTIQDYQQARLTRDPRFDGRFFIAVKSTGIFCRPICPAKLPHEENVEYYTLAQQAMLAG
YRPCLRCRPDSAPHSHAWNGVDTTVNRALRILGENLHLSMTAIAEKLGISDRYLRQLFIQ
HIGLSPKQYQVYEQILFAKQLLQHTQLPIEHVADAAGFKDARRLQYNMQRVMHRTPKELR
IKPSNLIQPIVIPLAYRPPYNWPHLRDFLARRAISGSEWVSQDSYARNFTFGTSKGYFQA
QHQPDKYRFLVTLAIDDLRQLKHCLSNVRRILDVDADSATIDNRIELSGLSKQTITPGIR
IPGIWNTFEAGCRAILGQQISVTAAINLVTKLVATIGEPVLDDQAPVPELNRYFPAPDAV
ANSDLSFLGMPNSRRETLRRFAAFYAQHPDTPPDDWLSIKGIGPWTVAYANLRGLSQADI
WLNSDLVIKKQLLLHDIDADKVSPWRSYLTFTLWSLA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatacaagattatcaacaagcgagacttacccgcgatcctcgtttcgatggg
cgtttttttattgcggtcaaatcgacagggattttttgccggccgatttgcccagcaaag
ctaccacatgaagaaaacgtcgaatactacaccttagcacagcaggccatgcttgcggga
tatcgcccctgtttacgctgtcgtccagacagtgcgccgcattcccacgcatggaacgga
gttgatactacggtcaatcgagcgctacggatacttggcgaaaacctacacctaagtatg
accgcaattgcagaaaaactcggtataagcgaccgctatttacgccaactttttattcaa
cacattggtcttagcccgaaacaatatcaagtctatgaacaaattctgtttgccaaacaa
ttattgcagcacacccaattgcctatcgaacatgttgcggatgccgcgggctttaaagac
gccagacgcttacaatataatatgcaacgcgtcatgcaccgtactccaaaggaattacgt
ataaaacccagtaacctgatacaacctatcgttattcctttagcctaccgcccgccgtac
aactggccccacttgcgtgactttctggcgcgccgagcaatatcaggtagcgaatgggtg
agccaagatagttacgcacgtaattttaccttcggaaccagcaaaggttattttcaggcc
cagcatcaaccagataaataccgctttctcgttaccttagcaattgatgatttgcggcaa
ctcaagcactgtttgagtaacgttcggcgcatattggatgttgatgcggatagcgcgacg
attgacaacagaatcgaattaagtggcttatccaaacaaaccattacccctggtatccgc
attcccggtatatggaatacctttgaagctgggtgtagagctattcttggtcagcaaata
tcagtgaccgcggctattaatcttgtcactaagctcgtggcaacgatcggagagcctgtt
cttgatgatcaggcgccagtgcctgaacttaatcgttattttccggcgcctgatgcagtt
gcaaacagtgacctcagttttttaggcatgcccaacagtcgtcgtgagaccctgcgccgt
tttgctgctttttatgctcagcaccctgatactccacccgatgattggttatcaattaaa
ggcattggtccatggacagttgcttatgctaatttgcgagggttatcccaagcggatatt
tggcttaactcagatttagtcatcaaaaaacagctacttttacatgacatagatgctgac
aaagtcagcccttggcgtagttatttaacatttactttatggagtctcgcgtaa
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