Paraglaciecola sp. T6c: Patl_3931
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Entry
Patl_3931 CDS
T00372
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00250
Alanine, aspartate and glutamate metabolism
pat00410
beta-Alanine metabolism
pat00430
Taurine and hypotaurine metabolism
pat00650
Butanoate metabolism
pat01100
Metabolic pathways
pat01110
Biosynthesis of secondary metabolites
pat01120
Microbial metabolism in diverse environments
pat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Patl_3931
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Patl_3931
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Patl_3931
00430 Taurine and hypotaurine metabolism
Patl_3931
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Patl_3931
Enzymes [BR:
pat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Patl_3931
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
ABG42431
UniProt:
A0A9J9BD43
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All DBs
Position
4742442..4744052
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AA seq
536 aa
AA seq
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MAVAEVSLEHLFRVFTMPEGKDSKLAQIEQHLSDNLADFLSQHVVTKVTSLEQIEQSFAE
FNVPEHPEFVSEHAANLLEKLVANSVNTYSPTFIGHMTSALPYFHLSLAKLLVGLNQNLV
KIETSKAFTPLERQVLGMMHELVYAQKSDFYNTYLHNANHALGAFCSGGTIANVTALWVA
RNKALAADGVFKGVAREGLAAGLAHYGYKKMAILSSRRGHYSLSKSVDILGLGREQLITL
DCPTQRLSPEKALAFGKEYAEQGNKILSIVGVAGTTETGHVDPLDELADVAQELGCHFHV
DAAWGGATLFSSTHRKILKGIERADSVTIDAHKQMYVPMGAGMVLFKDPNDSNAVRHHAN
YILRAGSKDLGATTLEGSRNGMAMMVYASLHIFGRQGYELLIDQSIEKAKVFARMIQSHP
DFELITHPTLSLLTYRVNPQEVQQQVKADFSLNVKFNEKLDKLTVYVQKQQREAGKSFVS
RTRLQTQTYGDQTMTVFRVVLANPLTTENDLQNILDEQIAIASKSQNWAELTEKVI
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtagctgaagtcagtttagagcatttgtttagagtgtttaccatgcccgaaggt
aaagattctaaattggctcaaattgagcagcatctgtcagataacttggctgattttttg
tctcaacacgtggtgaccaaggtcacgtcacttgagcaaattgaacaaagtttcgctgaa
tttaatgtgcctgaacacccagagtttgtctcggagcacgccgctaatttactcgagaag
ttagtcgctaattctgttaacacctattcgccaacgtttatcgggcacatgacctctgcc
ttaccttattttcatttatcgttagctaaattattagttggcttaaatcaaaatttggtc
aaaattgaaacctctaaagcctttacgcctttggagcgtcaagtattgggcatgatgcat
gaactggtgtatgcccagaaaagtgacttttataacacctatctacataacgctaatcac
gcgcttggggcattttgctctggcggcacgatagcgaacgtaaccgccttgtgggttgca
cgcaacaaagctttagccgccgatggcgtatttaaaggggtggcccgtgaaggcttagcg
gcaggtttagctcattatggctataagaaaatggcaattttgtcatctcgccgcggtcat
tactctctgtcaaaatctgtagatatactcgggttaggccgtgaacaactcatcacgcta
gactgccctacacagcgtttgtcgcctgaaaaggcacttgccttcggtaaagaatacgca
gaacaaggcaataaaattcttagcatagttggcgttgctggcaccacagaaacaggccat
gtagatccattagatgaactggctgacgttgcccaagagttaggttgccactttcatgtg
gacgcggcctggggcggtgctacgttattctcaagcacccatagaaagatcctaaaggga
attgaacgcgcagattcagttaccatagatgcgcacaagcaaatgtatgtgcctatgggc
gcgggtatggtgttgtttaaagatcctaacgacagcaatgcagtacgtcaccatgcaaac
tacatactacgagctggctcaaaagacttgggagccacgacattagaaggctcgcgtaac
ggtatggccatgatggtatatgcgtctttgcatatatttggtcgccaaggttacgaattg
ttgattgatcaaagtatcgagaaagcgaaagttttcgctcgaatgatccagtctcaccca
gatttcgagttgattacgcaccctactttgtcgttacttacttatcgagtgaatccccaa
gaggtgcagcaacaggtcaaagccgacttttcgttaaacgtaaaatttaatgaaaaactc
gataaactcaccgtatatgtacaaaagcagcaacgtgaggcgggtaagtcttttgtgtcg
cgtacccgcttacaaactcaaacttacggcgatcaaaccatgacagtgtttcgcgtggta
ttagcaaatccgttaaccactgaaaatgatttacaaaacatcctggatgagcaaatcgcg
attgccagcaaaagccaaaactgggctgagttaaccgaaaaggtaatctag
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