Paraglaciecola sp. T6c: Patl_3948
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Entry
Patl_3948 CDS
T00372
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pat03021
]
Patl_3948
Transcription machinery [BR:
pat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Patl_3948
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
ABG42448
UniProt:
A0A9J9EQH7
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Position
4758981..4759850
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AA seq
289 aa
AA seq
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MLHEVIMTTDMRALTLTVPQTGSIETYVQAVSSINMLTAEEERGLAERLQQEDDLLAARK
LIMSHLRFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVRRFDPTVGVRLVSFAVHWIKAE
IHEFVLRNWRIVKVATTKAQRKLFFNLRKNKKRLGWFTHAEVQKVASDLGVSEKEVLQME
ARMSSHDQAFDLSADDDESGSFAPVQFLEDKSADVETDVVNADWDATASQKLYSAIKTLD
ERSQHIIQTRWLSDDKTTLQDLADKYQVSAERVRQIEKNAMKKLQSAMA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgttacacgaggtgattatgacaacagatatgcgtgcactaacattaaccgttccacag
accggtagcatcgaaacttacgtgcaagctgttagcagcattaatatgctcacagccgaa
gaagaacgtggtctagcagaacgtttacaacaggaagacgacttattagcggcaagaaag
ctaatcatgtcacacctacgtttcgttgtgcatattgcaaaatcttattctggttacgga
cttcctcaagccgatttgattcaagaaggcaacatcggtttaatgaaagcggttagacgc
tttgaccctactgtaggggtcagattggtgtcgttcgctgtacattggattaaagctgaa
attcacgaatttgtgttgcgtaactggcgcatagtgaaagttgccaccacaaaggcacaa
cgtaagcttttctttaatctacgtaaaaataaaaagcgtttaggttggtttactcatgca
gaagtgcagaaggtggcaagtgacctgggagtaagcgaaaaagaagtattacaaatggaa
gctcgtatgagcagccatgaccaagcttttgatttatctgcagatgatgatgaaagcgga
agcttcgcgccggtacagtttttagaagacaaaagcgcagatgttgaaactgacgttgtt
aacgcagattgggacgcaacggcttcacagaagctatattcagcgattaaaaccctcgat
gagcgtagccagcatatcattcagacgcgctggttaagtgacgacaaaacaacgctacaa
gatttagcagataaataccaagtatctgccgagcgtgttcgtcaaatcgaaaagaacgct
atgaaaaaattacagagcgctatggcataa
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