Paraglaciecola sp. T6c: Patl_4198
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Entry
Patl_4198 CDS
T00372
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pat03000
]
Patl_4198
Transcription factors [BR:
pat03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Patl_4198
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ABG42697
UniProt:
A0A9J9BF57
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Position
5055940..5056827
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AA seq
295 aa
AA seq
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MNQLNYQHLYYFYVTATEGSIIKAASVLHLTPQTISEQIRTLEAYFGFDLFDRVGKRLQL
NSQGQLTYNFAKNIFSMGNELLLSVRHQQQNQQHVLSIGVTDVLPKILAFEMFQRSLTVH
PNVRLVCKEGDLNSLTAELALSKIDGILSDQPLLNTSNVKAYNHLLARSGLSFFVAQDLA
EKFVDFPQCLDNQPFLLPGDKSAQKLSILAWFAKHNINPQIAAEFDDCALMKLFAQRGYG
VFCAPTSVEHHIEKQYKVRVIGRTDMITEHLYLISPERKVTNPLLSPLVIKGAAR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagttaaattaccagcacttatattacttttacgtcacggcgaccgaaggcagc
atcataaaagcagccagcgttctgcacctcacaccacaaaccatcagcgaacaaattcgt
acccttgaggcatacttcggttttgacttgtttgacagagtgggtaaacgcttacagctc
aatagccaaggtcaactcacctacaattttgctaaaaacatttttagtatgggtaacgag
ttactgctttcagtgagacaccaacagcaaaaccaacaacacgtgttgtccataggggtg
accgatgtgttgcctaaaattcttgcattcgaaatgtttcaacgcagcttaacagtccat
ccgaatgtgcgcctggtatgtaaagaaggggatctaaatagccttaccgcagagctggca
ctgagtaaaattgatggtattttatctgaccaaccattactcaataccagcaatgttaaa
gcttataatcacttgcttgctcgcagtggattaagcttttttgttgctcaggacctagca
gagaagttcgttgacttcccacagtgtctagataaccaacccttcttattacccggcgat
aaatcagcccaaaagctatcgatacttgcttggtttgccaaacacaatatcaatccacag
attgcagctgaatttgacgactgcgcactaatgaaactatttgctcaacgcggctacggg
gtattttgtgcaccaacttccgtagagcatcatatagaaaaacaatacaaggtacgggtg
attggtcgcactgatatgatcacggaacatttgtatctgatttccccggagcgaaaagtc
accaaccctctattatcaccgttagtcattaaaggcgcggctcgttaa
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