Paraglaciecola sp. T6c: Patl_4238
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Entry
Patl_4238 CDS
T00372
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00190
Oxidative phosphorylation
pat00860
Porphyrin metabolism
pat01100
Metabolic pathways
pat01110
Biosynthesis of secondary metabolites
pat01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
Patl_4238
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Patl_4238
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pat01006
]
Patl_4238
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pat03029
]
Patl_4238
Enzymes [BR:
pat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
Patl_4238
Prenyltransferases [BR:
pat01006
]
Compound prenylation
Protoheme farnesyltransferase
Patl_4238
Mitochondrial biogenesis [BR:
pat03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
Patl_4238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
ABG42737
UniProt:
Q15N01
LinkDB
All DBs
Position
complement(5101880..5102797)
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AA seq
305 aa
AA seq
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MSKSVGVAPHNIVNKSGLHWRDYYEMTKPKVVMLLLLTALVGMCLASETWISWKILLAGL
TGIGFLSSAAAVINHVVDRKIDAQMARTSNRPMPKGKVSPQRALVFAGVLTVVGYLILEL
WVNRLTALLTLASLVGYAFIYTMYLKRATPQNIVIGGLAGAAPPLLGWTAVTNDIHAHAL
LLVLIIFIWTPPHFWALAIHREKDYARAKIPMLPCTHGIEFTKTSILLYTVLLALISVLP
YLIGMTGAIYLLGSSALNAGFLYYAWKLKFASDEHTAMKTFKFSIIHLMVLFVVLLVDHY
MRFTF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatctgttggtgttgcacctcataacatagtaaataaatcaggcctccactgg
cgtgattattatgagatgacaaaacctaaagtggtaatgttgctcctactgaccgctttg
gtagggatgtgtttggcgagtgaaacttggatcagttggaaaatacttttggcaggtttg
accggcattggttttttatcttctgcagcagcggttattaaccacgtagttgatcgtaaa
attgatgcgcaaatggcgcggacctcgaatcgcccgatgcctaaaggcaaagtttctccc
cagcgagcgctcgtttttgcaggcgtgcttacggtggtgggctaccttattttagaatta
tgggtcaatcgcttaaccgctttgttaacgttagccagtttagtggggtacgcatttatt
tatactatgtatttaaaacgcgctacgcctcagaatattgttattggcgggttagctggt
gcagcgccgccattactcggttggacggcggtaacgaatgatatccatgcacatgcatta
ctcttagtgctcatcatattcatttggacccccccacatttctgggcgttggccattcac
cgtgaaaaagactacgctcgggctaaaatcccgatgctgccatgcacgcacgggatcgaa
tttactaaaacatccattttactgtacacggtgctattagcgctcattagcgtgttacct
tatctgattggcatgacaggcgcgatatatttgctaggctccagcgcattaaatgctggc
ttcttgtattatgcatggaaattaaaattcgccagtgacgaacacaccgctatgaaaacg
tttaagttttcgattatccatttaatggtactgtttgtggtcttactggttgaccattat
atgagatttactttttga
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