Paraglaciecola sp. T6c: Patl_4254
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Entry
Patl_4254 CDS
T00372
Name
(GenBank) transcriptional regulator, LysR family
KO
K02521
LysR family transcriptional regulator, positive regulator for ilvC
Organism
pat
Paraglaciecola sp. T6c
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pat03000
]
Patl_4254
Transcription factors [BR:
pat03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Patl_4254
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_23
HTH_24
MarR
Fe_dep_repress
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ABG42753
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Position
complement(5121048..5121902)
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AA seq
284 aa
AA seq
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MDIRSLELFQHLASSLHFSKTAEALFVSPSTLSRVIQRLEDDCGTPLFVRDNRKVKLTAA
GAKLLRFSQQTLSEWKKVKWELQQDHEQIQGELSLFCSVTASQSHLPKLLDSFRHQYPQV
EIKLNTGDPALSASKVMKQEVDAAIAIHTPDFPPDLTFLPLGEVPLLLIAPKETQLTRLS
QVDWREHSVILPDSGPSKRIVHHWFAEQGIRPRVYATVAGNEAIVSMVALGCGLGIVPEI
VLDNSTISQRVNRIRLDDIEPYQIGLCCISKRQSEPAIQALFNC
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacattcgaagcttggaattattccaacatttagccagtagcttgcacttcagcaaa
actgctgaagcgttgtttgtcagtccctctacccttagtcgtgtcattcaacgccttgaa
gatgactgtggcacgccactgtttgtgcgggacaatcgaaaagtaaagctcaccgcagct
ggagcaaaactattgcgcttttcacagcaaaccttgtctgaatggaagaaagtcaaatgg
gagctgcaacaagatcacgagcaaattcaaggcgaattaagtttgttttgttcagtgacg
gccagtcaaagccatttgccaaaattacttgatagctttcgtcatcaatatccccaagta
gagataaagttaaacaccggcgaccctgccctatctgctagtaaggtgatgaaacaagaa
gtggatgcagccattgccattcatacccctgacttccctcctgacctgacgttcttaccc
cttggcgaggtgcctttactgcttatcgcacccaaagaaacccagctaacccgtttgagc
caagtggattggcgcgaacattctgtcattctgcctgactcgggaccatcaaaacgaatt
gtgcaccactggtttgctgagcaaggtattcgaccgcgagtgtacgcaacggtagcgggt
aatgaagcgattgtaagcatggtagcgctgggttgcggcttgggcattgtgcctgaaata
gtgttagacaattccaccataagtcagcgtgtaaaccgtattcggttggatgacattgag
ccttaccaaattggtttgtgttgcatcagtaagcggcaaagtgagcctgctattcaggcg
ctattcaactgctaa
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