Pseudomonas atacamensis: JWU58_00075
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Entry
JWU58_00075 CDS
T07336
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_00075
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JWU58_00075
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_5
HTH_20
MarR_2
HTH_30
HTH_IclR
HTH_24
I-HmuI_NUMOD-like
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QSL87717
LinkDB
All DBs
Position
14785..15702
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AA seq
305 aa
AA seq
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MSHDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGVSLFVKDGRGL
KLTDAGARLRDASAEAFDRLRSVCAELTQSTANAPFVLGCSGSLLARWFIPRLGRLNADL
PDLRLHLSAGEGDLDPRRPGLDALLLFAEPPWPADMQVYELAAERIGPVMSPLYSGYQKL
HTAVAADLFDEPLLHTTSRPQAWPSWAQQNHLNPKALKLGQGFEHLYYLLEAAVAGLGVA
IAPEPLVTEDLKAGRLVAPWGFCETPAQLALWLPKRAADGRARQLAQWLKNELPQTDHSP
RLNKK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgaccttcccccgctgaatgccttgcgcgccttcgaggccaccgcccgtctg
aacagtgtgagtcaggctgccgaacagctgcacgtcacccacggcgcggtcagccgccag
ctcaaggtgctcgaagaacatctaggggtgagcctgttcgtcaaggacggccgcggcttg
aaactcacagatgccggagcgcgtctgcgcgatgccagcgctgaggcgttcgatcggttg
cgcagtgtttgcgccgaacttacgcaaagcacagcgaatgcgccgttcgtgctgggttgt
tcggggagcctgctggcgcgctggtttattccgcgtctggggcggctgaatgccgatttg
cctgatctgcgcttgcacctgtcggccggtgaaggcgatctcgatccccggcgcccgggc
cttgatgcgttgttgctgttcgccgaaccaccgtggccggccgatatgcaggtctatgaa
ctggcggcggaacgcatcggccccgtaatgagcccgttgtatagcggttatcagaagctg
cacaccgctgtggccgcagatctttttgatgagcccttgctgcacaccacctctcgccca
caagcctggcccagctgggcgcagcaaaaccacctcaatcccaaggcgttgaagctcggg
caaggttttgagcatttgtattatttgctggaggcggctgttgcaggtctcggcgtggca
atcgcgccggagccgctggtaaccgaagatctgaaggcgggtcgcctggttgcgccgtgg
ggcttttgcgaaaccccggcgcaactggcgttgtggctacccaagcgcgccgcagacgga
cgcgcccggcaactggcgcaatggctcaaaaacgagctgccccagactgatcactcaccg
cgcttgaacaaaaagtag
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