Pseudomonas atacamensis: JWU58_00785
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Entry
JWU58_00785 CDS
T07336
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00010
Glycolysis / Gluconeogenesis
pata00020
Citrate cycle (TCA cycle)
pata00260
Glycine, serine and threonine metabolism
pata00280
Valine, leucine and isoleucine degradation
pata00310
Lysine degradation
pata00380
Tryptophan metabolism
pata00620
Pyruvate metabolism
pata00630
Glyoxylate and dicarboxylate metabolism
pata00640
Propanoate metabolism
pata00670
One carbon pool by folate
pata00785
Lipoic acid metabolism
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata01120
Microbial metabolism in diverse environments
pata01200
Carbon metabolism
pata01210
2-Oxocarboxylic acid metabolism
pata01240
Biosynthesis of cofactors
Module
pata_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pata_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pata_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pata_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pata_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JWU58_00785 (lpdA)
00020 Citrate cycle (TCA cycle)
JWU58_00785 (lpdA)
00620 Pyruvate metabolism
JWU58_00785 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JWU58_00785 (lpdA)
00640 Propanoate metabolism
JWU58_00785 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JWU58_00785 (lpdA)
00280 Valine, leucine and isoleucine degradation
JWU58_00785 (lpdA)
00310 Lysine degradation
JWU58_00785 (lpdA)
00380 Tryptophan metabolism
JWU58_00785 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JWU58_00785 (lpdA)
00670 One carbon pool by folate
JWU58_00785 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pata04147
]
JWU58_00785 (lpdA)
Enzymes [BR:
pata01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JWU58_00785 (lpdA)
Exosome [BR:
pata04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JWU58_00785 (lpdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
HI0933_like
Lys_Orn_oxgnase
AlaDh_PNT_C
GIDA
Thi4
FAD_binding_3
FAD_binding_2
NAD_binding_8
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QSL87858
LinkDB
All DBs
Position
complement(165361..166761)
Genome browser
AA seq
466 aa
AA seq
DB search
MSNYDVVILGGGPGGYNAAIRAGQLGLKAACVEGRATLGGTCLNVGCMPSKALLHASELY
AAAVGTEFANLGIEVEPKLNLAQMMKQKDESVAGLTKGIEFLFRKNKVDWIKGWGHIDGP
GKVTVTDAQGNKSELSAKDIIIATGSEPTPLPGVEIDNQRILDSTGALSLSEVPKHLVVI
GAGVIGLELGSVWRRLGAQVTVVEYLDRICPGVDGEAGKTLQRALSKQGIAFKLSSKVTS
ATSSATGVQLSVEPAAGGTAELIEADYVLVAIGRRPYTQGLGLENVGLSTDKRGMLANKQ
HRTEAAGVWVIGDVTSGPMLAHKAEDEAMACVEQIHGKAGEVNYALIPNVIYTQPELASV
GQTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVLADERTDEVLGVHLVGPSVSE
MIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVEGMATQM
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactatgacgtggtaattctgggcggtggccccggcggttataacgcggcgatc
cgcgccggccagctcgggctcaaggccgcttgcgtcgaaggacgtgcaaccctcggcggc
acctgtctgaacgtcggttgcatgccgtccaaagccttgctgcacgcgtcggagctgtac
gccgctgcggtgggcacggagttcgccaatctcggcatcgaggtcgaaccgaagctgaac
cttgcgcagatgatgaaacaaaaagacgagagcgtcgccggcctgaccaagggcatcgag
tttctgtttcgcaagaacaaagtcgactggatcaagggttggggccatatcgacggcccg
ggcaaagtgacggtgaccgacgctcaaggcaacaagagcgagctcagcgccaaggacata
atcatcgccaccggttccgagcccactcccctgcccggcgtagagatcgacaaccagcgc
atcctcgattccaccggcgcgctgtcattgagtgaagtacccaaacatctggtagtgatt
ggtgccggggtgatcggcctggagctgggttcggtatggcgccgactcggcgcgcaggtc
accgtggtcgaataccttgatcgcatctgccccggcgtcgatggcgaggccggcaagacc
ttgcagcgcgcgctgagcaaacaaggcattgccttcaaattgagttccaaggtcaccagc
gccaccagttccgccacaggcgtgcagctgagtgtcgagcctgccgctggcggcacggct
gaactgatcgaagccgattatgtgctggtggccatcgggcgccggccgtacacccagggc
ttggggctggagaacgtcggcctcagtaccgacaaacgcggcatgctcgccaacaagcaa
catcgcaccgaagccgccggggtctgggtgatcggcgacgtcacgtccggcccgatgctc
gcgcacaaggctgaagacgaagccatggcctgcgtcgagcagatccacggcaaggctggc
gaggtcaattacgcgctgatccccaacgtcatctacacccaaccggagctggccagcgtc
ggccagaccgaagaacagctcaaggccgagggccgtgcctacaaggtcggcaagtttcct
ttcaccgccaacagccgggcgaagatcaatcacgaaacagaaggctttgccaaagtcctc
gccgacgagcgcacggacgaagtgcttggcgtgcatctggtcgggccgagcgtgagcgag
atgatcggcgaattctgtgtggcgatggagttcagcgcctcggccgaggacattgccctg
acctgccatccgcacccgacgcgttcggaagcgttgcgtcaggcagcgatgaatgtcgag
gggatggcgacgcagatgtag
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