Pseudomonas atacamensis: JWU58_00920
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Entry
JWU58_00920 CDS
T07336
Name
(GenBank) LysR family transcriptional regulator
KO
K21711
LysR family transcriptional regulator, putative pyruvate carboxylase regulator
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_00920
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JWU58_00920
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
SBP_bac_11
PBP_like
Motif
Other DBs
NCBI-ProteinID:
QSL87884
LinkDB
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Position
complement(196163..197125)
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AA seq
320 aa
AA seq
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MRKSLMRMTLRQLQIFNEVCDLRSYSRAAEEMSLTQPAVSLQIRQLEELIGQPLFDYVGK
KLYMTEAAEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAVESSAKYFVPHLFAAFK
RQHPEVNLQLTVVNRGQVIRRLSDNRDDLVIMSMVPQDMGLEFLPFLNNPIVAVARPDHP
LAHMGPLRLQDLEPYTLLIREPGSGTRLACEEYFKEKRVHFTQTQEVASAEAQRECVVAG
LGLALLTRHALNLELATGGLVELPVEELPLLRSWCLVQAKAKRLSPVAHAFLAFIRSERA
QIIAMVERFDGKLRGSPASA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagtcgttgatgcgtatgacattgcgtcagttgcagatcttcaatgaggtgtgt
gatttacgctcctacagccgcgccgccgaggaaatgtccctcacacagccggcggtgagc
ctacagattcgtcagcttgaagagctgatcggtcagccgcttttcgactatgtcggcaaa
aaactctacatgaccgaggcggcggaagcgctccaacgtgccagtcgcgacattttcggg
cggctggaaaacctcgatatgcaactgtcggacatgcagggttcgctgcagggtcagctg
aaactggcagtggaatcgagcgcgaaatatttcgtgccgcatctgtttgctgcgttcaag
cgccagcatccggaagtcaatttgcagctgactgtggtcaaccgtggccaggtcattcgc
cgcctctcggacaatcgcgatgatctggtgatcatgtcgatggtgccgcaggacatgggc
ctggaatttctgccgtttctcaacaatccgattgtcgccgtggcgcgcccggatcacccg
ctggcgcacatgggcccgctgcgcttgcaggatctggagccgtatacgctgctgatccgc
gagccgggctcgggcacgcgtctggcctgcgaagaatatttcaaggaaaagcgcgtgcat
ttcacccagacccaggaagtagcgtccgccgaagcccagcgcgaatgcgtggtggcgggt
ctgggcctggcgctgttgacgcgccacgccctgaacctggagctggcgaccggcggcttg
gtcgagctgccggtcgaagagttgccgctgctgcgcagctggtgtctggtgcaggccaaa
gccaagcggctgtcaccggtggcgcacgccttcctggcgtttatccgcagcgagcgggcg
cagattattgcgatggttgagcgtttcgacgggaagctgcggggctcgcctgccagtgcg
tga
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