Pseudomonas atacamensis: JWU58_01210
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Entry
JWU58_01210 CDS
T07336
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pata
Pseudomonas atacamensis
Pathway
pata02025
Biofilm formation - Pseudomonas aeruginosa
pata03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JWU58_01210 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JWU58_01210 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pata02044
]
JWU58_01210 (tssH)
Secretion system [BR:
pata02044
]
Type VI secretion system
Imp/Vas secretion system core components
JWU58_01210 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
Clp_N
NACHT
TniB
AAA_7
nSTAND3
Sigma54_activat
NBD_SMAX1
AAA_30
AAA_25
AAA_24
Hpr_kinase_C
CorA
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QSL87941
LinkDB
All DBs
Position
264389..267046
Genome browser
AA seq
885 aa
AA seq
DB search
MINVDLQQLIQALDAETRRDLERSAERCVARGGSKILVEDLLLGLLERPNGLLSRALQDA
DVDAGELTAALQSRVEHSASRNPVFAPELVQWLQDALLVANLELGQTQVEDAALILALLR
NPMRYAGSRYQPLLAKLNIDRLKEFALSQQEQPAANGKPAAQGESLLQRFTHNLTQQARD
GKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKG
VELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSD
AANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLA
QVYEKSHGIYLRDDAVVSAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLER
LRGELAEGGRQRQALRRDAEAGLLIDHEALEALEARLDEAESEMVALETLWTEQKELAER
LLELRQQLAKAREAAAVEPTVSVEEDAEGTVIETVVAEVEEGQSVEALEAQLHETHAALT
AAQVKERLVSFEVCPRLVAEVISAWTGVPLAQLAREHNAKVASFATDLRTRIRGQEQAVH
ALDRSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQ
EKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGV
ANDGEGREIDFRNTLILMTSNLGSDKISELCEDGARPTAEVLEETIRPVLSKHFKPALLA
RMKVVPYYPVGGPVLRELIEIKLGRLGERLNRRQLEFSWCQNLVDHLSERCTQSESGARL
IDHLLDQHVLPLVADRLLDAMATGESLKRVHATLDGNSSVTCEFV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaactcatccaggcgctggacgccgaaacccgtcgtgat
ctggaacgttcggccgagcgttgcgtcgcccgtggcggcagcaagatcctcgttgaagac
ttgctgctgggcttgctcgagcgcccgaacggcttgctgtcgcgcgcgctgcaagatgct
gacgtcgacgccggtgaactgaccgctgcattgcagtcgcgggtcgagcacagcgcttcg
cgcaacccggtgttcgccccggaactggtgcaatggctgcaagacgcgctgctggtggcc
aacctcgagctgggccagacccaggtcgaagacgccgcgctgatcctggcgttgctgcgc
aacccgatgcgttatgccggcagccgttatcagccgctgctcgccaagctgaacatcgat
cgcctgaaagaatttgccctgtcgcaacaagagcaaccggcggctaacggcaaaccggcg
gcgcagggcgaatcgctgttgcagcgtttcacccacaacctgacccagcaggctcgcgac
ggcaaactcgacccggtgctgtgccgtgacggcgcgatccggcagatggtcgacatcctc
gcccgtcgccgcaagaacaacccgatcgtcgtcggtgaggccggtgtcggtaagaccgcc
atcgtcgaaggcctcgcctcgcgcatcgctgccggtgaagtgccgcaggtactcaaaggc
gttgaattactctcgctggacatgggcctgttgcaggccggagccagcgtcaaaggtgaa
ttcgagcgtcgtttgaaaggcgtgatcgatgaagtcaaagcctcgccgaaaccgatcatc
ctgttcatcgacgaagcccacaccctgatcggtgctggcggcaacgctggcggttccgat
gcggccaacctgctgaagccggcgctggcccgtggcgaactgcgcaccatcgccgcgacc
acttgggccgagtacaagaaatacttcgagaaagacccggcgctggcccgtcgcttccag
cctgtgcaattgcacgaaccgaccgtgagcgaagcggtgaccattctgcgtggtctggct
caggtctacgagaagagccacggcatctacctgcgcgatgacgcggtggtgtccgctgct
gaattgtccgcgcgttacctggccggtcggcaactgccggacaaggccgtcgacgtcctc
gacaccgcgtgcgcccgcgtgcgcatcagcctcgctgcggccccggaaagcctcgagcgc
ctgcgtggcgaactggcggaaggtggccgtcagcgtcaggcgctgcgtcgcgatgccgaa
gccggtctgctgatcgaccacgaagcgctggaagcactggaggcgcggctggacgaagcc
gaaagcgagatggttgcgctcgagactttgtggactgagcaaaaagaattggctgagcgt
ctgctggaactgcgtcagcaactggccaaggcccgcgaagccgcagcggtcgagccgacc
gtcagcgtggaagaagacgccgaaggcaccgtgattgaaaccgtggtcgccgaagtcgaa
gaaggccagagcgtcgaagcgctggaagcccagctgcatgaaacccacgccgcgttgact
gccgcgcaagtcaaagaacgcctggtcagcttcgaagtgtgcccgcgtctggtcgccgaa
gtgatcagcgcctggaccggcgtgccattggcgcaactggcccgcgagcacaacgccaag
gtcgccagtttcgccaccgatttgcgcacccgcatccgtggtcaggaacaagccgtgcac
gcgctggatcgttcgatgcgcgccaccgctgccggcctgaacaagcctgatgcaccggtc
ggtgtgttcctgctggtcgggccgagcggcgtcggcaagaccgaaaccgcgctggccctg
gctgacctgttgtacggcggcgaccgcttcatcaccaccatcaacatgtccgagttccag
gaaaagcacaccgtctcgcgtctgattggcgcgccaccgggctacgtcggttacggcgag
ggcggcatgctcaccgaagcggtgcgtcagaagccgtattcggtggtgttgctcgatgaa
gtcgagaaggccgacccggacgtgctcaacctgttctaccaaatcttcgacaaaggcgtg
gccaacgatggcgaaggtcgcgagatcgacttccgcaacacgttgatcctcatgacctcg
aaccttggcagcgacaagatcagcgaactctgcgaagacggcgcgcggccgaccgccgaa
gtgctcgaagaaaccattcgcccggtgctcagcaaacacttcaaaccggcgctgctggcg
cggatgaaagtggtgccgtactacccggtgggcggcccggtgctgcgcgagctgatcgaa
atcaaactcggccgtctcggcgagcgcctgaaccgtcgtcagctggagttcagctggtgc
cagaacctcgtcgatcacctgtccgagcgttgcacgcaaagcgaaagcggtgcgcgcctg
atcgatcatctgctcgatcaacacgtgctgccgttggtggccgatcgtctgctcgatgcg
atggcgaccggcgaaagcctcaagcgtgtgcatgccacgctcgacggcaactccagcgtg
acctgcgagttcgtctga
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