Pseudomonas atacamensis: JWU58_01235
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Entry
JWU58_01235 CDS
T07336
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pata
Pseudomonas atacamensis
Pathway
pata02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JWU58_01235 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pata02044
]
JWU58_01235 (tssK)
Secretion system [BR:
pata02044
]
Type VI secretion system
Imp/Vas secretion system core components
JWU58_01235 (tssK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QSL87946
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Position
270739..272070
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AA seq
443 aa
AA seq
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MNTHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGGYTWGFLNLEIDLQFLNMGKLV
ISEASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYDAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICDVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLSHRGDTIAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSGESKRPRLDSRYSHADQGASFRKL
MEAIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRQR
LPQHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccataaagtcatttggcaggaaggcatgctgctgcgaccgcagcacttccag
cacaacgatcgttattacgatcaccagatgaaaacccgcacgcaattgctcggtggctac
acctggggttttctcaatctggaaatcgacttgcagttcctcaacatgggcaaactggtg
atcagtgaagcctcggggattctgccggacggcagcctgttcgaactcggtggcaacacc
gagccgctggcgctggacgtgccgccgaacaccggcaacacgccgatctatctggcgctg
ccgctggtcaccggcaaccacatcgaggcccggcgcccggagcaatcggacgtgctcgcg
cgctacaccgcgtatgacgccgaagtcgccgactccaacgccggcgatgattccgccagc
caggtcagctgcggtcggccggacttcaaactgttgctcggcgagcagcagagcgatcag
gcctacgtgaagctgaaaatctgcgacgtgctcgacaccacgcccgacggcgtcatcagc
ctcgacccggatttcgtcccgacctacattcaggcccacgcctccagctacctgctgtcg
tgcctgaaagaagtcatcagcatgctcagccaccgtggcgacaccatcgccgagcggatt
cgctccaacggcaaggtcggcggcgctgaagtcggcgacttcatgatgctgcaactgatc
aaccgcaccgaactgctgctgcgccattacctcggtctggaacaagtgcatccggaagag
ttgtaccgcacgctgctgaccatgctcggcgatctggcgaccttctccggcgagagcaaa
cgcccgcgcctggacagccgctattcccacgccgatcagggcgcaagctttcgcaaactg
atggaagcgatccgtcaggtgctgtcgatggtgctcgaacagcacgccatcgaactgatc
ctgcaggcgcgtcagtacggcatcattgtttcgccgttgcacgatcacaaactgctcggc
tcggcttcgttcgtgctggcagccagtgccaactgcgactccgaagaactgcgtcagcgt
ttgccgcagcacctcaaggtcggcccggtggagcgcatccgccaactggtaaacctgcac
ttgccggggatcaaggtcaaaccgttgccggtggccccacggcagatcgcgttccactcg
aacaaaacctatttcattctcgaactcagttccgaagacctggcacaactcgaacgctcc
ggcggtttcgcgttccacgtgtccggcgaattcgccgagcttgaactgaaattctgggcc
atcaggaactga
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