Pseudomonas atacamensis: JWU58_01430
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Entry
JWU58_01430 CDS
T07336
Symbol
crc
Name
(GenBank) catabolite repression control protein Crc
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWU58_01430 (crc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pata03400
]
JWU58_01430 (crc)
Enzymes [BR:
pata01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JWU58_01430 (crc)
DNA repair and recombination proteins [BR:
pata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JWU58_01430 (crc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
QSL87983
LinkDB
All DBs
Position
complement(317937..318716)
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLFPSGMNGDEDLN
QKFKLMDDFGKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRSVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggcggcagtcgagcgcggtttgctc
agttggctgcaagcccagaatgccgacgtcatctgcctgcaggacacccgtgcctccgcc
tttgaactggatgacccagccttccaactggatggctacttcctttatgcctgcgatgct
gaagtccctgcccaaggcggcgtggctttgtattcgcggttgcaaccgaaggctgtcatc
agcggtctcggtttcgagacggccgaccgctacgggcgctacctgcaagcagatttcgac
aaagtcagtattgccaccttgctgtttccttcggggatgaacggcgatgaagacttgaac
cagaagttcaagctcatggacgatttcggcaagtacctggacaaacagcgacgcaaacgt
cgcgagtacatttattgtggctcgctgtacgtcgcgcagcagaagctcgacatcaagaac
tggcgcgacagccagcaatctccaggcttcctggcgccggaacgcgcctggatggacgag
attgtcggcaacatgggctatgtcgatgcgctgcgcgaagtcagccgcgaaggcgaccag
tacagctggtggccggataacgaacaggccgagatgctcaatctgggctggcgtttcgat
tatcagatcctgaccccgggcctgcgtcgctcggtgcgcagtgcacgcctgccgcgtcag
ccacggttttcgcagcacgcgccgttgatcgtcgactacgactggacgctgaccatctaa
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