Pseudomonas atacamensis: JWU58_01660
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Entry
JWU58_01660 CDS
T07336
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00300
Lysine biosynthesis
pata00470
D-Amino acid metabolism
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata01120
Microbial metabolism in diverse environments
pata01230
Biosynthesis of amino acids
Module
pata_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWU58_01660 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWU58_01660 (lysA)
Enzymes [BR:
pata01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JWU58_01660 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QSL88026
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Position
complement(364865..366112)
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AA seq
415 aa
AA seq
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MDAFNYRGGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAHLPNLEVVGVDCHIGSQLTTLPPFIDALDRLLDLVDRLGDCGIHLRHIDLGGGL
GVRYRDEEPPVAADYIKAVRERLDGRDLALVFEPGRFIVANGGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVKPRDSAARNYDIVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQVFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgtggcggggagctgttcgcggaaggtgtggcgctgtccgcc
atcgccgaccgcttcggcacgcccacctatgtctactcgcgcgcccacatcgaagcgcag
tatctggcctacgccgatgcgctggccggcatgccgcatctggtctgcttcgcggtcaaa
gccaactccaacctcggtgtactgaatgtcctggcccgtctcggcgccggtttcgacatc
gtttcccgtggcgagctggaacgtgtactggccgctggtggcagcgccgacaagatcgtt
ttctccggcgtcggcaagacccgtgacgacatgcgccgcgccctcgaagtcggcgtgcac
tgcttcaacgtcgaatccaccgacgagctcgagcgcctgcaagtagtcgccgccgagctg
ggtgttcgcgccccggtttcgctgcgcgtgaacccggacgtagatgccggcacccatccg
tacatttccaccggtctgaaagagaacaagttcggcatcgccattgccgatgccgaagac
gtgtacgtgcgcgccgcgcatctgccgaacctggaagtggtcggtgtcgactgccacatc
ggttcgcaactgaccaccctgccgccattcattgacgccctggatcgcttgctcgatctg
gtcgaccgtctgggcgattgcggcattcacctgcgccacatcgatcttggtggtggcctg
ggcgtgcgttatcgcgatgaagagccgccggtggctgccgactacatcaaagccgtgcgc
gagcgtctcgacgggcgtgatctggcgctggtgttcgaaccgggtcgcttcatcgttgcc
aatggcggcgtgttgctgacccaggtcgaatacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctgtatcaggcgtggatg
gacgtcaccgcagtgaaaccgcgcgacagcgctgcacgcaattacgacatcgtcggcccg
atctgcgaaaccggcgacttcctcgccaaggatcgcgagctggcgctggaagagggcgac
ttgctggcagtgcattcggccggtgcctacggtttcgtcatgagctccaactacaacact
cgcggccgtgccgctgaagtgctggtggatggtgatcaggtttttgaagtgcgtcgccgc
gaaaccgtggccgagctgtttgccggcgaaagcctgctgccggagtaa
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