KEGG   Pseudomonas atacamensis: JWU58_01660
Entry
JWU58_01660       CDS       T07336                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pata  Pseudomonas atacamensis
Pathway
pata00300  Lysine biosynthesis
pata00470  D-Amino acid metabolism
pata01100  Metabolic pathways
pata01110  Biosynthesis of secondary metabolites
pata01120  Microbial metabolism in diverse environments
pata01230  Biosynthesis of amino acids
Module
pata_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pata00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    JWU58_01660 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    JWU58_01660 (lysA)
Enzymes [BR:pata01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     JWU58_01660 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QSL88026
LinkDB
Position
complement(364865..366112)
AA seq 415 aa
MDAFNYRGGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAHLPNLEVVGVDCHIGSQLTTLPPFIDALDRLLDLVDRLGDCGIHLRHIDLGGGL
GVRYRDEEPPVAADYIKAVRERLDGRDLALVFEPGRFIVANGGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVKPRDSAARNYDIVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQVFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactaccgtggcggggagctgttcgcggaaggtgtggcgctgtccgcc
atcgccgaccgcttcggcacgcccacctatgtctactcgcgcgcccacatcgaagcgcag
tatctggcctacgccgatgcgctggccggcatgccgcatctggtctgcttcgcggtcaaa
gccaactccaacctcggtgtactgaatgtcctggcccgtctcggcgccggtttcgacatc
gtttcccgtggcgagctggaacgtgtactggccgctggtggcagcgccgacaagatcgtt
ttctccggcgtcggcaagacccgtgacgacatgcgccgcgccctcgaagtcggcgtgcac
tgcttcaacgtcgaatccaccgacgagctcgagcgcctgcaagtagtcgccgccgagctg
ggtgttcgcgccccggtttcgctgcgcgtgaacccggacgtagatgccggcacccatccg
tacatttccaccggtctgaaagagaacaagttcggcatcgccattgccgatgccgaagac
gtgtacgtgcgcgccgcgcatctgccgaacctggaagtggtcggtgtcgactgccacatc
ggttcgcaactgaccaccctgccgccattcattgacgccctggatcgcttgctcgatctg
gtcgaccgtctgggcgattgcggcattcacctgcgccacatcgatcttggtggtggcctg
ggcgtgcgttatcgcgatgaagagccgccggtggctgccgactacatcaaagccgtgcgc
gagcgtctcgacgggcgtgatctggcgctggtgttcgaaccgggtcgcttcatcgttgcc
aatggcggcgtgttgctgacccaggtcgaatacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctgtatcaggcgtggatg
gacgtcaccgcagtgaaaccgcgcgacagcgctgcacgcaattacgacatcgtcggcccg
atctgcgaaaccggcgacttcctcgccaaggatcgcgagctggcgctggaagagggcgac
ttgctggcagtgcattcggccggtgcctacggtttcgtcatgagctccaactacaacact
cgcggccgtgccgctgaagtgctggtggatggtgatcaggtttttgaagtgcgtcgccgc
gaaaccgtggccgagctgtttgccggcgaaagcctgctgccggagtaa

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