KEGG   Pseudomonas atacamensis: JWU58_03970
Entry
JWU58_03970       CDS       T07336                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pata  Pseudomonas atacamensis
Pathway
pata00740  Riboflavin metabolism
pata01100  Metabolic pathways
pata01110  Biosynthesis of secondary metabolites
pata01240  Biosynthesis of cofactors
pata02024  Quorum sensing
Module
pata_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pata00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    JWU58_03970 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JWU58_03970 (ribD)
Enzymes [BR:pata01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     JWU58_03970 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     JWU58_03970 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QSL88460
LinkDB
Position
852034..853167
AA seq 377 aa
MTTAAEQAILDAHFMARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHERAGEPHAE
VHALRAAGEQARGATAYVTLEPCSHHGRTPPCADALVTAGVARVVAAMRDPNPQVAGRGL
QRLAEAGIATESGVLEAEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWIT
GPAARSAVQRLRAEAAVVLTGADTVLADGARLTVRADELGLNTEQTALAMSRPPLRVLID
GRLRVPLDAPFFKAGPALVATCVAVEEQYANGPECLIVPGDDGQVDLHQLLIELAHRGTN
EVLVEAGPRLAGAIAQLGLVDEFVIFIAGKFLGSTARPLLDWPLAQMKDAPELKITEIRA
VGDDWRVTAIPVPSARV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaccaccgccgccgagcaggcgatcctcgacgcccacttcatggcccgcgcgctggaa
ctggcgcgcaaaggccactacaccacccatcccaatccgcgagtcggttgcgtggtggtg
cgtgacggccagattgtcggcgaaggctggcatgagcgcgccggcgaaccccatgccgaa
gtccacgccctgcgcgccgctggcgagcaggcccggggcgccacggcgtatgtgaccctc
gagccttgcagccaccacgggcgcacgccgccgtgcgccgatgccttggtgaccgctggc
gttgcccgggtcgtggcggcgatgcgtgatcccaatccgcaagtcgccgggcgcggtttg
cagcgcctggccgaggccggtatcgccaccgaaagtggtgtgctggaggctgaagcacgc
aagctcaatcaaggttttctgaaacgcatggaacatggcttgccgttcgtgcgggtcaag
ctggccatgagcctcgacgggcgcacagcgatggaaagcggcgagagccaatggatcacc
ggcccggcggcgcgttcagcggtacagcgtttgcgcgctgaggcggcagtagtgctgacc
ggcgccgacacggtgctggccgatggcgcgcggttgaccgtacgcgcggacgaattgggc
ctgaataccgagcaaacagcgctggccatgagtcgcccgccattgcgcgtattgatcgac
ggccgcctgcgggtgccgctggatgcaccgttcttcaaggccgggccggcgctggtcgcc
acctgtgtcgcggtcgaggagcaatatgccaatggcccggaatgcctgatcgtgccgggt
gacgacggccaggtcgatctgcatcaattgctcatcgaactggctcatcgtggcaccaat
gaggtgctggtcgaggccgggccgcgtctggccggcgccattgcgcaactggggctggtc
gacgaattcgtgatcttcattgccggcaagttccttggctccacggcgcgtccgctgctc
gactggccgctggcgcagatgaaagatgcgccggaactgaaaatcactgaaatccgcgcg
gtgggcgatgactggcgagtcactgcgatccctgtcccttcggcccgcgtataa

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