Pseudomonas atacamensis: JWU58_04025
Help
Entry
JWU58_04025 CDS
T07336
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_04025
Transporters [BR:
pata02000
]
Other transporters
Pores ion channels [TC:
1
]
JWU58_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QSL88471
LinkDB
All DBs
Position
complement(860426..862285)
Genome browser
AA seq
619 aa
AA seq
DB search
MNLSRLALPFLLLPTASVLADTFEREQALKLPDTLISANRQVEARNDSSAANTVFTREDI
DRLQPSDVPDLLRRVPGVQVAQTGGRGSLPGIYIRGTQSAQSLVLVDGQRIGNSTSGDSN
LQHLNIEQIERVEVLRGSRSVIYGSDAIGGVIQIFTRRGTEQGLQPRLHVGFGSQQTWER
SLGLSGGDDKTRFNLGASLDETAGLDRTHESYPSDSDHDAYRNKSLSLSLSHALTDDVEV
GANLLDNRGRSEFDSPSGSVQQQPYSDFNVSSVSNYFDARVNNIWKTRVEFGHTENREKT
LDKLFDEHYVFNTYRDSVNWQNDLALDARNSLIVGSDWYEDRVNSSTAFDEDSRWNRAAF
IQHRYEADSFSTELGLRHDDNEQFGSENSWSGTFTLPLNPDNDVLLSYSEGFRAPTFNDL
YYPSYSNPDLKPETSKSYELQWRSKLGENSRVEASLYQIDLKDAIIYADGRPPQNVASAR
INGFEAALKHELFGWQSNLGVAIIDPRDRDTGHTLARRARRTASWDLDRQFDRLGLGASW
QLVSGSYDDLNNTQSLGGYGTLGLRSSWALSREIKLDLKVDNLLDKGYSRANYSYDGAQY
GYREEGRAWMFGVTWTPEL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctcgcgcctcgccctgcccttcctcctgctgccaaccgccagcgtccttgcc
gatacattcgaacgcgaacaggcgctgaagctgccggacacgctgatcagcgccaatcgt
caggtcgaggcgcgcaacgacagcagcgccgccaacaccgtgttcacccgcgaagacatc
gatcgcctgcaaccaagcgacgtgcccgatctgctgcggcgcgtgcccggcgtgcaagtg
gcgcagaccggcgggcgcggcagtctgccggggatctacattcgcggcacgcaatcggcg
cagagcctggtgctggtcgatggccagcgcatcggtaactcgacttccggcgacagtaac
ctgcaacatctgaacatcgagcagatcgagcgcgtcgaagtgctgcgtggttcacgctcg
gtgatttacggcagcgacgcgattggcggggtgatccagatcttcacccggcgcggcacc
gagcaaggcttgcagccacgcctgcatgtgggctttggcagtcagcagacatgggaacgc
agcctcggcttgtccggcggtgacgacaaaacccgtttcaacctcggcgccagcctcgac
gaaacggccgggctcgaccgtacccacgagtcgtatccaagcgacagcgaccatgacgcc
taccgcaacaaatccctgagcctgagcctcagccacgcgctgaccgatgacgtcgaagtc
ggcgccaatctgctggataaccgtggcaggagcgaattcgacagtccgtccggatcggtg
caacagcagccctatagtgacttcaacgtcagtagcgttagtaactactttgatgcgcgg
gtcaacaacatctggaaaacccgcgtcgagttcggccataccgaaaaccgcgagaagacg
ctggataaactcttcgacgaacactatgtcttcaacacttatcgcgactcggtgaactgg
cagaacgacctggcgctcgatgcgcgcaacagcttgatcgtgggcagtgactggtacgaa
gaccgggtcaacagcagcactgcattcgacgaggacagccgctggaaccgcgcagcgttc
atccagcatcgctatgaggccgacagcttctctacggagctgggcctgcgtcacgatgac
aatgagcaattcggcagtgagaattcctggagtggcaccttcaccctgccgctcaatccg
gataacgacgtgctgctgagctacagcgaaggtttccgcgcgccgaccttcaacgacctg
tactacccgagctacagcaacccggatctgaaacccgaaacctcaaagagctacgaactg
caatggcgcagcaagctcggtgaaaatagccgtgtagaggcctcgctttaccaaatagac
ttgaaggacgcgattatctacgccgacggcaggcctccacagaacgttgcgtcagcgcgc
atcaacggttttgaagcagcgttgaagcacgagctgtttggctggcagagcaatcttggc
gtggcgatcattgacccacgtgatcgcgataccgggcatacgctggcgcgacgggcgcgg
cgcacggccagttgggatctggatcggcagtttgatcgcttgggtctcggcgccagctgg
caattggtcagcggcagttacgatgatttgaacaacactcagtcgctgggcggctacggc
acgcttggactgcgcagcagttgggcgctgagccgtgagatcaagctggatctgaaggtg
gataacctgctggacaagggctacagccgggcgaattacagctatgacggcgcgcagtat
ggctatcgtgaggaaggtcgggcgtggatgttcggggtgacgtggacccctgaactctga
DBGET
integrated database retrieval system
