Pseudomonas atacamensis: JWU58_04330
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Entry
JWU58_04330 CDS
T07336
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pata03016
]
JWU58_04330 (miaB)
Enzymes [BR:
pata01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JWU58_04330 (miaB)
Transfer RNA biogenesis [BR:
pata03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JWU58_04330 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QSL88529
LinkDB
All DBs
Position
complement(931583..932911)
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AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPDMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAARS
SKLPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VIAEIIHLAENGVREVTLLGQNVNGYRGQTHDGRLADLAELIRVVAAVDGIDRIRYTTSH
PLEFSDSLIQAHAEVPELVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFEQTMKLIADVGFDFSYSFVYSQRPGTPAADLADDTPEELKKE
RLNALQHRLNQQGFEISRQMVGSIQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPTLI
GQFADVHIDAAQPHSLRGSLIQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtacgacagctcg
cgcatggtcgatctgctgggcgaacatcaggccctggaagtcaccgctcgcgcggaagac
gccgacgtgattctgctcaacacctgctcgatccgcgaacgcgcgcaagaccgcgtgtat
tcgcagctcggccgctggcgcgaactgaagctggccaaccccgacatggtcatcgccgtc
ggcggttgcgtggccagtcaggaaggcgcggcgatccgcgatcgcgctccctacgttgac
gtggtgttcggcccgcagaccctgcaccgtctgccggagatgatcgacgccgcgcgcagc
agcaagctgccgcaggtcgacgtgtcgttcccggaaatcgaaaaattcgaccacctgccg
gagccgcgtatcgacggcccgagcgcttatgtgtcagtgatggaaggttgcagcaagtac
tgcacgttctgcgtggtgccgtacacccgtggcgaagaggtaagccgaccgttcgacgac
gtgatcgcggaaatcattcacctcgctgagaacggcgtgcgtgaagtgaccttgctcggg
cagaacgtcaacggctatcgcggccagacccacgacggtcgcctggccgacctggccgaa
ctgatccgcgtggtcgccgctgtcgatggcatcgaccgcatccgctacacgacgtcgcat
ccgctggagttctccgacagcctgatccaggcccacgccgaagtgccggaactggtcaag
cacctgcacttgccggtgcagtcgggctccgaccggattctcgcggcgatgaagcgtaac
cacacggcgctggagtacaaatccaagctgcgcaaattgcgcgccgccgtaccggggatc
tgcatcagttcggacttcatcgtcggtttccccggcgaaaccgaaaaggacttcgaacag
accatgaagctgattgccgatgtcggcttcgatttctcctactcgttcgtctatagccag
cgcccgggcacgcccgctgccgatctggccgacgacacgccggaagaattgaagaaagaa
cgcctgaacgcgctgcaacatcgtctgaatcagcagggcttcgagatcagccgacaaatg
gtcggctcgatccagcgcattctggtgaccgattactcgaagaaagacccgggcgagctg
caagggcgtaccgagaataaccgtatcgtcaacttccgctgcgacaatcccaccctgatc
ggtcagttcgccgatgtgcacatcgacgccgcgcaaccgcactcactgcgtggttcttta
attcaataa
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