Pseudomonas atacamensis: JWU58_04375
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Entry
JWU58_04375 CDS
T07336
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pata03009
]
JWU58_04375
Enzymes [BR:
pata01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
JWU58_04375
Ribosome biogenesis [BR:
pata03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JWU58_04375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
DUF8666
Motif
Other DBs
NCBI-ProteinID:
QSL90267
LinkDB
All DBs
Position
943457..944053
Genome browser
AA seq
198 aa
AA seq
DB search
MKPRSSAPRRVAKAPPAEPKLILFNKPFDVLTQFSDGEGRATLKDYIDVPGIYPAGRLDR
DSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPTAEQLQRLRDGVELNDGMTLPAE
ARQLAEPQLWPRNPPVRFRATIPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGD
WTIEGLDQGQWREVPARL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctcggtcttctgcgccgcgccgtgttgccaaagcaccaccggccgagccgaaa
ctgatcctgttcaacaaacccttcgatgtgctgacgcaattcagcgacggtgaagggcgg
gcgacactcaaggattacatcgatgtgccggggatttacccggccggacgtctggatcgc
gacagcgaaggtttgttgctgctgaccaacgacggccagttgcaggcgcgcatcgccgat
ccgaaacacaaactggcgaagacttattgggtgcaggtggagggcgagccgacggccgag
cagttgcagcgcctgcgtgatggcgtcgagctgaatgacggcatgactctgcccgccgaa
gcgcggcaactggctgagccgcagttatggccgcgcaatccgccggtacgctttcgcgcg
accataccgacctcgtggctggaattggtgattcgcgaagggcgcaaccgtcaggtgcgg
cgcatgacggcagcggtcggattgccgacgttgcgtctggtgcgagtcaggattggtgac
tggacgattgaagggctggatcagggccagtggcgggaagtgccggcgcgcttataa
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integrated database retrieval system
