KEGG   Pseudomonas atacamensis: JWU58_04440
Entry
JWU58_04440       CDS       T07336                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pata  Pseudomonas atacamensis
Pathway
pata03030  DNA replication
pata03430  Mismatch repair
pata03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pata00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JWU58_04440
   03430 Mismatch repair
    JWU58_04440
   03440 Homologous recombination
    JWU58_04440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pata03032]
    JWU58_04440
   03400 DNA repair and recombination proteins [BR:pata03400]
    JWU58_04440
Enzymes [BR:pata01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JWU58_04440
DNA replication proteins [BR:pata03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JWU58_04440
DNA repair and recombination proteins [BR:pata03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JWU58_04440
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 Ribosomal_L26
Other DBs
NCBI-ProteinID: QSL88550
LinkDB
Position
955019..955624
AA seq 201 aa
MERIAVIDFETTGLSPNSSCRATEIAVVMLENGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRTAPPAERVMEEVNEFVGCTPLLAHNASFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFARLPHTGQAHRAMADAEMAANLMAHLAQELRGKHGVRELNHD
LLCKLQKVPAAKVGEHLQRYR
NT seq 606 nt   +upstreamnt  +downstreamnt
ttggaacgcattgcagtcatcgactttgaaaccaccggcctgtcgccgaacagcagctgc
cgcgccacggaaatcgccgtggtcatgctggaaaacggccgcatcgtcgagcgttaccag
agcctgatgaacgccggcgtgcgcgtccccgcgttcatcgagcaactgaccggcatcagc
aacgccatgctgcgcaccgcgccgccggccgagcgggtgatggaagaggtcaacgagttc
gtcggttgtacgccgctgttggcgcacaacgcctcgttcgaccaaaagttctgggatttc
gaactagggcggatcaaacgcacccgcctgcagaatttcgcctgttcactgctgctggcg
cggcgcctgatgccggcggcgccgaatcacaagctcggcacgctcaccactttcgcgcgg
ctaccgcataccggtcaggctcaccgggccatggccgacgccgagatggcggccaatctg
atggcgcatctggcgcaagagttgcggggcaagcacggggtgcgcgagttgaatcacgac
ctgttgtgcaagttgcagaaagtccctgcggcgaaagtcggcgagcatttgcagcgttat
cgctga

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