Pseudomonas atacamensis: JWU58_04520
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Entry
JWU58_04520 CDS
T07336
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pata03016
]
JWU58_04520 (trmA)
Enzymes [BR:
pata01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
JWU58_04520 (trmA)
Transfer RNA biogenesis [BR:
pata03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
JWU58_04520 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Cons_hypoth95
Methyltransf_11
Methyltransf_12
MTS
RrnaAD
DREV
Methyltransf_15
TRM5-TYW2_MTfase
Ubie_methyltran
PrmA
Motif
Other DBs
NCBI-ProteinID:
QSL88566
LinkDB
All DBs
Position
complement(972374..973453)
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AA seq
359 aa
AA seq
DB search
MSFDSQAYAEQLEAKVTRLRDLLAPFDAPEPSVFDSPLQNFRLRAEFRLWREGGERHYAM
FSQDDKRTPILIEEFPIASLRINQLMPQLKAAWQASSALSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHAAATQLSADLGVSIIGRSKGKREVLGQDYVVEKLEVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEALGDRSDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLSENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPDTLAANIAQLHDTHRITKCAMFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgattcccaagcctacgccgaacaactcgaagccaaggtcacgcgcttgcgt
gatctgctggcgccgttcgatgcacccgagccgtcggtctttgattcgccgctgcagaac
ttccgcctgcgcgccgaattccgcctgtggcgcgagggcggcgaacgccattacgcgatg
ttctctcaggacgacaagcgcacgccgatactcatcgaagaattcccgattgccagcctg
cgcatcaaccagttgatgccgcagttgaaggccgcgtggcaagccagttcggcgctgagc
cacaagctgttccaggtcgaatttctgaccacactggccggcgacgcgatgatcaccctg
tgctatcaccgtccgctggacgagcactggcatgcggcagccactcagttgtcggcggat
ctgggcgtgagcatcatcggccgctccaaaggcaagcgcgaagtgctcggtcaggactat
gtcgtcgagaaactcgaagtcggcggtcgcaccttcagctatcgccagcccgaaggcgcg
ttcacccagcccaacggcacggtgaaccagaagatgctcaattgggcatacgaagccttg
ggcgatcgcagcgacgatctgctcgagctgtactgcggcaacggtaacttcaccctgccg
ctggcgactcgcgtgcgcaaagtgctcgccaccgagatcagcaagacttcggtcaacgcg
gccctgagcaatctcagcgaaaacgctgtggataacgtcacgctggtgcgtttgtccgcc
gaggagctgaccgaagcgctcaacgaagtgcgcccgttccgtcgcctgcacggcatcgat
ctgaagagctacgaattcggcagcgtcttcgtcgacccaccgcgcgccggcatggatccg
gacacctgcgaactgacccggcgcttcgacaacatcctctacatttcctgcaacccggac
accctggcggctaacatcgcccagttgcatgacacccaccgcattaccaagtgcgcgatg
tttgaccagttcccgtggacccatcacatggaatccggtgtgctgctgacccggcgttga
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