Pseudomonas atacamensis: JWU58_06085
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Entry
JWU58_06085 CDS
T07336
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_06085 (treR)
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
GntR family
JWU58_06085 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_41
Rrf2
DIP2311-like_C
HTH_11
FmdA_AmdA
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QSL88855
LinkDB
All DBs
Position
complement(1302927..1303631)
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AA seq
234 aa
AA seq
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MSKYNQIYSDLLASITTQRLERGARLPSETELMDTYQASRGTVRKAIDQLQERGFAQKIH
GKGAFVLSTNPIEFQLGGIVSFQETHPRLGNDVSTEVVEMCQVPLEGALLEHINAEPGSP
ITRIKRVRRIDGKRVILDINHFVSEVIPDLSADIAEHSIYAHIEQTLQLQIAYAQRTIEA
VPSSKDDQQHLDLDGQSHVIVVSNQTFLQDGRQFEYTESRHTLDKFYFSDVARR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtacaaccagatctacagcgatttgcttgccagtatcaccacccagcgcctg
gagcgcggcgcccggctgccttccgaaaccgaactgatggacacctatcaggccagccgt
ggcacggtgcgcaaggccatcgaccagttgcaggagcgcggtttcgctcagaagattcac
ggcaaaggcgcgttcgtgctgtcgaccaacccgatcgaattccagctcggcggcatcgtc
agttttcaggagacccacccgcgactgggcaacgatgtcagcaccgaagtggtcgagatg
tgtcaggtgccgcttgaaggtgcattgcttgaacatatcaatgccgaacccggcagcccg
atcacccggatcaagcgggtacggcgcatcgacggcaaacgcgtcatcctcgacatcaac
cacttcgtcagcgaggtgattcccgacctgtccgctgacattgccgaacattcgatctac
gcccatatcgaacagaccctgcaactgcagatcgcctacgcccagcgcaccatcgaagcc
gtaccgtccagcaaggacgaccaacaacacctggacctcgacggccagagccatgtcatc
gtggtcagcaaccagaccttcctgcaggacggccgccagttcgaatacaccgaatcgcgg
catacgctggacaagttctatttttcggatgtggcgcggcgctga
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