Pseudomonas atacamensis: JWU58_06330
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Entry
JWU58_06330 CDS
T07336
Name
(GenBank) DeoR/GlpR family transcriptional regulator
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_06330
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
JWU58_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
MarR
HTH_Crp_2
HTH_PafC
HTH_20
GntR
MarR_2
Put_DNA-bind_N
HTH_Mga
Sigma70_r4_2
Sigma70_r4
HTH_28
TFIIE_alpha
DDRGK
Motif
Other DBs
NCBI-ProteinID:
QSL88901
LinkDB
All DBs
Position
complement(1360276..1361031)
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AA seq
251 aa
AA seq
DB search
MNLPPRQQQILELVRERGYVSIEEMATLFVVTPQTIRRDINQLAEANLLRRYHGGAAYDS
SVENTAYAMRADQMRDEKQRIGEAIAAQIPDHASLFINIGTTTESIARALLNHSHLKIIT
NNLHVASMLSAKDDFDVLLTGGNVRRDGGVVGQASVDFINQFKVDFALVGISGIDEDGSL
LDFDYQEVRVSQAIIANARQVILAADSSKFGRNAMIRLGPISLIDCLVTDQQPVPALTQL
LSQHKIRLEVV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcctccccgtcagcagcaaatcctcgagctggtccgcgaacgcggctatgtc
agcatcgaggagatggccacactgttcgttgtcaccccgcaaaccatccgccgcgacatc
aatcagctcgcggaagccaatctgctgcgtcgctaccacggtggcgccgcgtacgattcc
agtgtcgaaaacaccgcgtatgcgatgcgcgccgatcagatgcgcgacgaaaagcaacgc
atcggcgaagccatcgccgcacagatccccgatcacgcctcgctgttcatcaatatcggt
accaccaccgaatcgatcgcccgcgccctgctcaatcacagtcacctgaaaatcatcacc
aacaacctgcacgtcgcctcgatgctcagcgccaaggatgatttcgatgtgctgctgacc
ggcggcaatgtaaggcgggacggcggtgtggtcggtcaggcgagtgtggatttcatcaat
cagttcaaggtcgatttcgccttggtcgggatcagcggcatcgatgaggacggcagcctg
ctcgacttcgattatcaggaagttcgcgtttcccaagcgatcattgccaatgcgcggcag
gtgattctggcggcggactcgagcaagttcgggcgtaacgcgatgattcgactggggccg
atcagcctgatcgattgcctggtcaccgatcagcagccggtaccggcgctgacgcagttg
ttgagtcagcacaagattcgcttggaagtcgtctag
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