Pseudomonas atacamensis: JWU58_06885
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Entry
JWU58_06885 CDS
T07336
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pata
Pseudomonas atacamensis
Pathway
pata01501
beta-Lactam resistance
pata02020
Two-component system
Module
pata_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JWU58_06885
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWU58_06885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_06885
01504 Antimicrobial resistance genes [BR:
pata01504
]
JWU58_06885
Transporters [BR:
pata02000
]
Other transporters
Pores ion channels [TC:
1
]
JWU58_06885
Antimicrobial resistance genes [BR:
pata01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
JWU58_06885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
BPL_C
Motif
Other DBs
NCBI-ProteinID:
QSL89009
LinkDB
All DBs
Position
complement(1498573..1499922)
Genome browser
AA seq
449 aa
AA seq
DB search
MRVMKWSMIALAVAAAASSQLATAAPFVDDQAEAKGFVEGAKLTETLKNYYFNRDNKNGG
RDQKDWTQGFLGNFTSGYTQGTVGVGIDAYGYLALKLDGGDGTSGTGNMSRSDTVKANGY
ARDVNDSQGKAGASIKFRVSKTELKFGDMQPSTSPVFAVGGSRILPQTATGFQLQSSEVK
DLDLEAGHFYSGSSQDKNARDGGLYATYAGVEANNIDYFGGKYSITDNLSASLYGAKLED
IWNQYYANVNLTTPFGGDTSLNTDFNIYRTTDTGSAEAGDISNTAFSLATALSFLKAHTF
TLGFQKVNGDTPFDYIGVGKNNRGGDSIFLANSIQYSDFNAPGEKSIQARYDLKMAEYGV
PGLSFMVRYVKGWDIDGTNTPAGSAYAGLYGEDGKHHETNFEAKYVVQSGPAKDLSFRIR
QAWHVANADEGEGDVKEFRLITEYPLNIL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggcagttgcagcagcagccagttcgcag
ttggctacggccgccccgttcgtagatgaccaggcagaagccaaaggttttgttgaaggt
gcgaaactcaccgagacgttgaagaactactacttcaaccgcgacaacaagaacggtggc
cgtgaccagaaagactggacccagggtttcctcggcaacttcacctccggttatacccag
ggcaccgtgggtgtaggtattgatgcatacggctatctggccttgaaactggatggcggt
gacggtacttccggtactggcaacatgagccgtagcgataccgtcaaggccaacggctat
gcccgcgacgtcaacgacagtcagggcaaggcaggcgcttccatcaagttccgtgtctcc
aagaccgaactgaaattcggcgacatgcagccaagcacttctccagtgttcgctgtcggc
ggttcccgcatccttccgcaaactgccactggcttccagttgcagagcagcgaagtgaaa
gatctggacctggaagccggccacttctactccggctccagccaggacaagaacgcacgc
gatggcggcctctacgctacctacgccggtgttgaagcgaacaacatcgactacttcggc
ggcaaatactcgatcactgacaacctcagtgcatcgctgtacggcgccaagctggaagac
atctggaaccagtactacgccaacgtgaacctgaccaccccgttcggtggtgatacttcg
ctgaacaccgacttcaacatctaccgcaccaccgacaccggcagcgctgaagcgggcgac
atcagcaacaccgcattctcgctggctaccgcgctgtcgttcctgaaggcacacaccttt
accctgggcttccagaaggtcaacggcgataccccgttcgactacatcggtgtgggcaag
aacaaccgtggcggcgactcgatcttcctcgccaactcgatccagtactctgacttcaac
gctcctggcgagaaatccatccaggctcgttatgacctgaaaatggccgagtacggcgtt
cctggcctgagcttcatggttcgttacgtcaaaggttgggatatcgacggtaccaacact
ccagcgggcagcgcttacgccggtctgtatggtgaagatggcaaacaccacgaaaccaac
tttgaggccaagtacgttgttcaaagcggtccggctaaagacctgtccttccgcattcgt
caagcttggcacgttgccaacgccgacgaaggtgaaggcgatgtcaaagagttccgtctg
atcaccgagtacccgctgaacatcttgtaa
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