Pseudomonas atacamensis: JWU58_07210
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Entry
JWU58_07210 CDS
T07336
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00061
Fatty acid biosynthesis
pata00071
Fatty acid degradation
pata01100
Metabolic pathways
pata01212
Fatty acid metabolism
pata02024
Quorum sensing
pata04146
Peroxisome
Module
pata_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JWU58_07210
00071 Fatty acid degradation
JWU58_07210
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JWU58_07210
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWU58_07210
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pata01004
]
JWU58_07210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pata04147
]
JWU58_07210
Enzymes [BR:
pata01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JWU58_07210
Lipid biosynthesis proteins [BR:
pata01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JWU58_07210
Exosome [BR:
pata04147
]
Exosomal proteins
Exosomal proteins of breast milk
JWU58_07210
Exosomal proteins of breast cancer cells
JWU58_07210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QSL89070
LinkDB
All DBs
Position
1567601..1569289
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDMGEFKSVIEVFERSCKKFADRPAFSSMGITLTYAELERQSA
AFAGYLQAHTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTPREMRHQFKD
SGARALVYLNLFGQKVQEVLPDTDIQYLIEAKMGDLMPTAKGWLVNTVVSKVKKLVPEYS
LPQATSFKSALRMGRGLGIKPLNVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACLAQLGPDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLISNPRDIAGFI
KELKNWRFSALLGLNTLFVALMDHPDFKTLDFSSLKLTNSGGTALVKATAERWEQMTGCR
ITEGYGLTETSPVACTNPYGDQSRLGTVGLPVPGTLVKIINDDGVEQPLGERGELCIKGP
QIMKGYWNKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARESGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcccggccggcgtaccgctggacatcgacatg
ggcgagttcaagtcggtcattgaagtgtttgagcgttcctgcaagaaattcgctgaccgc
ccggcgttcagcagcatgggcatcaccctgacctacgctgaactcgagcgccagagcgcg
gcgttcgccggttatctgcaggcccataccgatctggtgccgggggatcgcattgcggtg
cagatgcccaacgttctgcattatccgattgccgtgttcggcgccctgcgcgccgggctg
atcgtggtcaacaccaacccgctgtacacgccacgggaaatgcgccaccagttcaaggat
tccggcgcgcgcgcgttggtctacctgaatctgttcgggcagaaagtccaggaagtgctg
cccgacaccgacatccaatatttgatcgaagcgaagatgggcgacctgatgcccaccgcc
aaaggctggctggtcaacaccgtggtcagcaaagtgaagaaactggttcccgagtattcg
ctgccgcaagcgacctcgttcaaaagcgcgctgcgcatgggccgcggcctgggcatcaag
ccactgaacgtcggcctcgatgatatcgccgtgctgcaatacaccggcggcaccaccggc
ctggccaagggcgcgatgctcacccacggcaatctggtggcgaacatgcagcaggtgcgc
gcctgtctggctcagctcggcccggacggtcagccgctgttgcgcgaaggccaggaggtg
atgatcgcgccgctgccgctgtaccacatctatgccttcaccgcgaattgcatgtgcatg
atggtctcgggcaaccacaacgtgctgatttccaatccgcgcgacatcgccggcttcatc
aaggaactgaagaactggcgcttctcggcgctgctgggtttgaacaccttgttcgttgcg
ctgatggatcatcccgatttcaagaccctggatttctccagcctgaagctgaccaactcc
ggcggcaccgcgctggtcaaggccaccgccgagcgctgggagcagatgaccggttgccgt
attaccgaaggctacggcctgaccgaaacctcgccagtggcctgcaccaacccctacggc
gatcagtcgcgcttgggtacggtgggcctgccggtgccgggcacgctggtgaaaatcatc
aacgatgacggcgtcgaacagccgctgggcgagcgcggcgagctgtgcatcaaaggcccg
cagatcatgaagggctactggaacaaacccgaagccaccgccgaagtgctggatgccgag
ggttggttcaagtccggtgatatcgccgtgatcgacccggacggttttgtgcgcatcgtc
gatcgcaagaaggacatgatcatcgtctccggcttcaacgtttatcccaacgaaatcgaa
gacgtggtcatggcccacccgaaagtcgccaactgcgcggtcatcggcgtgccggacgaa
cgttcgggagaggcggtgaagctgtttgtggtggcgcgggagagcggggtcagcctggaa
gagctgaaggcgtactgcaaagagaatttcacggcctacaaggtgccgaaacacatcgtg
ctgcgtgagtcgttgccgatgacgcctgtagggaaaattctgcggcgcgagttgcgggat
atcgcctag
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