Pseudomonas atacamensis: JWU58_07375
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Entry
JWU58_07375 CDS
T07336
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_07375
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JWU58_07375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
TetR_C_41
TetR_C_6
HTH_22
TetR_C_42
HTH_11
LacI
Motif
Other DBs
NCBI-ProteinID:
QSL89103
LinkDB
All DBs
Position
complement(1600419..1601027)
Genome browser
AA seq
202 aa
AA seq
DB search
MTAPQRLTDRKREAIIQAAIAEFRAHGFEITSMDKIAATAGVSKRTVYNHFPSKEELFAE
ILNQLWARIIAEPSVSYDRERPLHEQLRLMLQEKVQMMADENFLTLARVAIAATIHSPER
AQNMIERMGEREEGLTVWIRAAQADGRLKPVDPEFAAHQVQGLLKAFAFWPQISLGRAAL
DPDAQNAVAESALEMFLALYQR
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctccacaacgcctcaccgatcgcaaacgcgaagccatcatccaagcggcgatc
gccgaattccgtgcccacgggttcgaaatcaccagcatggacaagatcgccgccacggcg
ggggtgtcgaagcggacggtgtacaaccacttcccgagcaaggaagagctgttcgccgag
atccttaatcagttgtgggcgcggatcattgccgagccatcggtgagctacgaccgcgag
cgaccgctgcatgagcagctgcgcctgatgctgcaagaaaaagtgcagatgatggctgac
gagaattttctcaccctcgcccgggtggcgattgccgcaaccattcattcccccgaacgt
gcgcagaacatgatcgagcgcatgggcgagcgcgaggaaggcctgaccgtctggatacgc
gcagcacaagccgacggacggctcaagccggtggatccagaatttgccgcgcatcaagta
caaggtttgctcaaggcattcgcgttctggccgcagatctcgctgggtcgcgcggccctt
gatccagacgcgcagaatgcagttgccgagtcggcgctggagatgttcctggcactgtat
cagcggtga
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