Pseudomonas atacamensis: JWU58_08525
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Entry
JWU58_08525 CDS
T07336
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pata03032
]
JWU58_08525 (gyrA)
03400 DNA repair and recombination proteins [BR:
pata03400
]
JWU58_08525 (gyrA)
Enzymes [BR:
pata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JWU58_08525 (gyrA)
DNA replication proteins [BR:
pata03032
]
Prokaryotic type
DNA Topoisomerases
JWU58_08525 (gyrA)
DNA repair and recombination proteins [BR:
pata03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JWU58_08525 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QSL89319
LinkDB
All DBs
Position
1857569..1860223
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AA seq
884 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDYN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTRVPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERV
QEPSEIEGEELEGEEGEEIAGSVGIDEAGEDQQLDAAADEEPQE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcaatgagcgtgatcgtcggccgtgcactgccggatgcgcgcgatggc
ctcaagcccgtgcaccgtcgcgtactgttcgcgatgagcgagctgggcaacgactacaac
aagccgtacaagaaatctgcccgtgtcgtcggcgacgtgatcggtaagtatcacccgcac
ggtgacactgccgtgtacgacaccatcgttcgtatggcccagcctttctccctgcgctac
ctgctggtcgacggccagggcaacttcggttcggtcgacggcgacaacgctgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggctgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaactgatcccggcggtcatgccg
acccgcgtaccgaacctgctggtcaacggttccagcggtatcgccgtaggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaac
cccgagctgaccgtcgatgagctgatgcaatacattcccggtccggacttcccgacggct
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggtcgcgggcgcatt
tacatgcgtgcccgctcgatcatcgaagacatcgacaaggtcggtggccgtcagcagatc
gtcatcaccgagctgccttaccagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtcaaagagaagaagctcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggtatgcgtgtcgtgatcgaactgcgtcgcggcgaagtgccggaggtgatcctcaacaac
ctctacgcccagacccagctgcaatcggtgttcggtatcaacatcgtcgcgctgatcgac
ggccgcccacgcatcctcaacctcaaggatctgctggaagccttcgtccgtcaccgccgc
gaagtggtcacccgtcgtaccgtgttcgaactgcgcaaggcgcgcgagcgcgggcacatt
cttgagggccaggccgttgccctgtcgaacatcgacccggtcatcgccctgatcaaggcc
tcgccaacgccgtcggaagccaaggaagcgctgatcagcacgccttgggaatcctcggct
gtggtggcgatggttgagcgtgccggtgccgattcgtgccgtccggaaaacctcgatccg
caatacggcctgcgtgaaggcaagtacttcctctcgccagaacaggcgcaagccattctc
gaactgcgcctgcaccgtctgaccggtctggagcacgagaagctgctggccgagtatcaa
gagattctcaaccagatcggcgagctgatccgcatcctcaacagcgctgtgcgcctgatg
gaagtgatccgcgaagaactggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gaaattctcgatgcccgtctcgacctgaccctgggcgacatgatcccggaagaagagcgc
gtcgtgaccatctcccacggtggctacgccaagacccagccgctggctgcgtaccaggct
cagcgtcgtggcggcaaaggcaagtcggccaccggcgtcaaggacgaggactacatcgct
cacctgctggttgccaatagccacaccacgctgctgctgttctccagcaagggcaaggtt
tactggctcaagacctacgaaattccggaagcatcccgcgctgcccgtggtcgtccgctg
gtcaacctgctgccgctggatgacggtgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcactacatcttcatggctaccgccaacggcaccgtgaagaagaccccg
ctggaatccttcagccgtcagcgcagcgtcggtctgatcgcgctggagctggacgaaggc
gacgtgctgatctctgcagccatcaccgatggcgagcgcgaagtgatgctgttctccgac
ggcggcaaggtcacccgcttcaaagagtccgacgtgcgtgccatgggccgtaccgctcgc
ggcgtgcgcggcatgcgtctgccggaagggcagaagctgatttccatgctgatcccggaa
gaaggcagccagatcctcaccgcttccgagcgtggttatggcaagcgcaccgcgatcacc
gagttccctgagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgagcgt
aacggccgtctggtcggcgcagttcaggtgctcgacggcgaagaaatcatgctgatctcc
gatcagggcaccctggtgcgtacccgtgtcgacgaagtgtcgagcctgggacgtaatact
cagggcgtgacgctgatcaagctggccaaggatgaaaccctggtcggcctggagcgggtt
caggagccttcggaaatcgaaggcgaagagctcgaaggtgaagagggcgaggaaatcgca
ggcagcgtcggtatcgacgaagcgggtgaagaccagcaactcgacgccgcagcagacgaa
gaaccgcaggaataa
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