Pseudomonas atacamensis: JWU58_08575
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Entry
JWU58_08575 CDS
T07336
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00521
Streptomycin biosynthesis
pata00523
Polyketide sugar unit biosynthesis
pata00525
Acarbose and validamycin biosynthesis
pata00541
Biosynthesis of various nucleotide sugars
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata01250
Biosynthesis of nucleotide sugars
Module
pata_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JWU58_08575 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JWU58_08575 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JWU58_08575 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JWU58_08575 (rfbB)
00525 Acarbose and validamycin biosynthesis
JWU58_08575 (rfbB)
Enzymes [BR:
pata01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JWU58_08575 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QSL89329
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All DBs
Position
1869900..1870976
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AA seq
358 aa
AA seq
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MKILVTGGAGFIGSAVIRHIISNTSDAVVNVDKLTYAGNLESLAEVSQNSRYAFERVDIC
DRDQIDRVLREHQPDAIMHLAAESHVDRSISGPSEFIQTNIIGTYTLLEAARHYWAALDD
TRKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWARTYGLP
TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPVYGKGNQVRDWLYVEDHARALYKVVT
EGVIGETYNIGGHNEKQNIEVVHTLCALLDELRPDSAHRPHASLITYVQDRPGHDVRYAI
DASKIQRELGWTPEETFETGIRKTVEWYLNNTEWVEHVKSGSYQQWIDQNYADRSSKA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattctagttaccggcggcgccggcttcattggctcggcagtcatccgtcacatc
atctccaacacttccgatgcagtcgttaacgtcgacaagctgacgtacgccggcaatctg
gagtccctggcagaagtcagccagaactcgcgttacgccttcgagcgcgtcgatatctgc
gatcgtgatcagatcgaccgcgttctgcgtgagcaccaaccggatgcaatcatgcacctg
gccgcagaatcccacgtcgaccgctcgatctccggcccgtccgaattcatccagaccaat
attattggcacctacacgctactcgaagcagcgcgccactactgggctgcgctggatgac
acgcgcaaagccaacttccgcttccaccacatttcgactgacgaagtttacggagacctc
gaaggtccggaagacctcttcaccgaaaccaccccttaccagccaagctcgccatactcg
gccagcaaggccagctccgaccacctggttcgtgcctgggcgcgtacttacggcctgccg
acactggtcaccaactgctcgaacaactacggcccatgccacttccctgagaagctgatc
ccgctgatcattctcaatgcgctggagggcaagccgctgccggtgtacggcaaaggcaac
caggttcgtgactggctgtacgtcgaagatcacgcgcgggcgctgtacaaagtcgtcacc
gaaggcgtcatcggcgagacttacaacatcggcggtcataacgaaaaacaaaacatcgaa
gtagtgcataccctgtgtgcgttgctcgatgagttgcgtcctgattctgcccatcggcct
cacgccagcctgatcacttatgttcaggatcgtcctggtcatgacgtgcgttacgcaatt
gatgcgagcaagattcagcgtgagctgggttggactccggaagagactttcgagactggc
attcgcaagactgtcgagtggtatctgaataacactgagtgggttgagcacgtgaagagc
ggtagctaccagcagtggattgatcagaactacgcggatcgttcgagcaaggcatga
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