KEGG   Pseudomonas atacamensis: JWU58_08575
Entry
JWU58_08575       CDS       T07336                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
pata  Pseudomonas atacamensis
Pathway
pata00521  Streptomycin biosynthesis
pata00523  Polyketide sugar unit biosynthesis
pata00525  Acarbose and validamycin biosynthesis
pata00541  Biosynthesis of various nucleotide sugars
pata01100  Metabolic pathways
pata01110  Biosynthesis of secondary metabolites
pata01250  Biosynthesis of nucleotide sugars
Module
pata_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:pata00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    JWU58_08575 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JWU58_08575 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    JWU58_08575 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JWU58_08575 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    JWU58_08575 (rfbB)
Enzymes [BR:pata01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     JWU58_08575 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short KR Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: QSL89329
LinkDB
Position
1869900..1870976
AA seq 358 aa
MKILVTGGAGFIGSAVIRHIISNTSDAVVNVDKLTYAGNLESLAEVSQNSRYAFERVDIC
DRDQIDRVLREHQPDAIMHLAAESHVDRSISGPSEFIQTNIIGTYTLLEAARHYWAALDD
TRKANFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWARTYGLP
TLVTNCSNNYGPCHFPEKLIPLIILNALEGKPLPVYGKGNQVRDWLYVEDHARALYKVVT
EGVIGETYNIGGHNEKQNIEVVHTLCALLDELRPDSAHRPHASLITYVQDRPGHDVRYAI
DASKIQRELGWTPEETFETGIRKTVEWYLNNTEWVEHVKSGSYQQWIDQNYADRSSKA
NT seq 1077 nt   +upstreamnt  +downstreamnt
gtgaaaattctagttaccggcggcgccggcttcattggctcggcagtcatccgtcacatc
atctccaacacttccgatgcagtcgttaacgtcgacaagctgacgtacgccggcaatctg
gagtccctggcagaagtcagccagaactcgcgttacgccttcgagcgcgtcgatatctgc
gatcgtgatcagatcgaccgcgttctgcgtgagcaccaaccggatgcaatcatgcacctg
gccgcagaatcccacgtcgaccgctcgatctccggcccgtccgaattcatccagaccaat
attattggcacctacacgctactcgaagcagcgcgccactactgggctgcgctggatgac
acgcgcaaagccaacttccgcttccaccacatttcgactgacgaagtttacggagacctc
gaaggtccggaagacctcttcaccgaaaccaccccttaccagccaagctcgccatactcg
gccagcaaggccagctccgaccacctggttcgtgcctgggcgcgtacttacggcctgccg
acactggtcaccaactgctcgaacaactacggcccatgccacttccctgagaagctgatc
ccgctgatcattctcaatgcgctggagggcaagccgctgccggtgtacggcaaaggcaac
caggttcgtgactggctgtacgtcgaagatcacgcgcgggcgctgtacaaagtcgtcacc
gaaggcgtcatcggcgagacttacaacatcggcggtcataacgaaaaacaaaacatcgaa
gtagtgcataccctgtgtgcgttgctcgatgagttgcgtcctgattctgcccatcggcct
cacgccagcctgatcacttatgttcaggatcgtcctggtcatgacgtgcgttacgcaatt
gatgcgagcaagattcagcgtgagctgggttggactccggaagagactttcgagactggc
attcgcaagactgtcgagtggtatctgaataacactgagtgggttgagcacgtgaagagc
ggtagctaccagcagtggattgatcagaactacgcggatcgttcgagcaaggcatga

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