Pseudomonas atacamensis: JWU58_09830
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Entry
JWU58_09830 CDS
T07336
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00300
Lysine biosynthesis
pata00470
D-Amino acid metabolism
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata01120
Microbial metabolism in diverse environments
pata01230
Biosynthesis of amino acids
Module
pata_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWU58_09830
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWU58_09830
Enzymes [BR:
pata01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
JWU58_09830
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QSL89566
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Position
2153423..2154403
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AA seq
326 aa
AA seq
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MTKFYDARGNIYGVVSPQALREAGIALPARAAECAVSRQQWSEAAIALCCHWPEGQRPAN
SKPHRSDGLLIGPFQALAPFDVLIVNTDGSLAERSGNGLTIFSQALTEQGLMAEQGVVLR
VHHDKGEALETAVTPAQVEGVRGFWLDLGRPGFGPRAVGAQAVESVQINNRDVSHVQPLA
ELDPDWSHSQFVRIGNPHCVTLLSDASALPSNEQMGESPLNERLTAIAYAMPTGAGNPCP
AGVNLQWAALVSPQKIAARVFERGEGPTASSGTSASAVACAAWRVGWVEAGEVRVVMPGG
TAPVLLEVSEGELLRVRLFGTARLAG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagttctacgacgcacgcggcaatatctacggagtggtctcgccccaagccttg
cgcgaagccggaatcgctttgccagcgagggccgcagagtgcgccgtatccaggcagcaa
tggagcgaggccgccatcgccttgtgctgtcactggcccgaaggccaacgcccggccaac
agcaaaccccaccgcagcgacggcctgctgatcggcccgttccaggcattggcgccgttc
gatgtactcatcgtcaacaccgacggcagcctcgccgagcgcagcggtaacggcctgacg
attttttctcaggcattgaccgagcaaggcttgatggcggagcagggcgtcgtgttgcgc
gttcatcatgacaagggcgaggcgctggaaaccgctgtgacaccggcccaagtcgaaggc
gtgcgcggtttttggctcgacctcggccggcccggattcggcccgcgagccgttggggcg
caggcagtcgagagcgttcaaatcaataatcgcgacgtcagccatgtccagccgctggcg
gaactcgatcctgactggagccacagccaattcgtccgtatcggcaatccgcactgtgta
acgctgctcagcgatgcaagcgctttgcctagcaacgaacagatgggtgaatcaccgctg
aacgagaggctgacggcaatcgcctatgccatgcccaccggtgccggcaatccctgtccg
gcgggcgtcaatctgcagtgggccgcgctggtgtcgccgcagaaaatcgctgcgcgggta
ttcgagcgtggcgaaggtccaaccgcgtcatccggcaccagcgccagtgcggtcgcgtgt
gcagcgtggcgggtgggttgggtcgaggcgggtgaagtgcgggtggtcatgccgggtggc
accgcaccggttttgcttgaggtttcggaaggggagttgctgcgcgtcagattgtttggc
acggcgcggttggcgggttga
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