Pseudomonas atacamensis: JWU58_10035
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Entry
JWU58_10035 CDS
T07336
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_10035
Transporters [BR:
pata02000
]
Other transporters
Pores ion channels [TC:
1
]
JWU58_10035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QSL89607
LinkDB
All DBs
Position
complement(2199644..2202355)
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AA seq
903 aa
AA seq
DB search
MLMNTPRFTLKPLVATMSRHRFVPLYLVAMGMGAGTVQAAEDDNSATPAAAVVAAPTTQL
QRVEVTGSAIRRVDAETAVPITILKAEELRKQGVTTTAELVQRITGSQSINNSAGSVGAA
TGGASFADMRGIGANKTLVLLNGRRLANNALSGTNSAGGAVDLNMIPFAAIERVEVLRDG
ASALYGTDAIGGVINFITKKSLTDGALTLGGETPTHSGGGATKDMSASWGYGDLEEDRFN
VLGVFNYNKQQNLDANDRSFATDYAPGRGLDQTSGTAFPGNYSQNGNATNPLANSNCNGP
NLIARDGLCRFSTREFIDLVPQTEKTSFFGKTTAKLGDDHNANLEYFWSRNNNAVAVGPA
PLTGLSLDSSSPYYPGNGITPAPTDFALDPTQPVDVNWRETAAGPRESKDQNTSQRFLLS
FDGLVGGWDYNVGASYNQNKIVSSVTSGYVSDQAMIDGLASGLLNPFGPQTAAGQQYIDA
AAYHGAYSTAVGRVAGFDGRVSREIGDWFGAGPSGLALGGEYRKEKFHQDFESFAGDIQS
LGIDPAGSVEGDRSVKAAYAELNVPVLDSLELSAAVRHDKYSDFGSTTNPKYSFRYQPLK
ELVVRGAYSEGFRAPSLYELYSPRSITFTQGFYNDPVLCTGGVVQPGGNGGRDCGQQFLN
QIGGNEDLAPEKARNVTLGFVYQPISNLSVGLDFWWIHISNQIQPFPESTVFDQAGSYPD
RFVRNADGTLNYIVTGNANLGIVETNGVDVSLDYRFPNTPYGQFGLGLQGTYVDEYDFQS
TIKGPFTDKVGDFQGDGVIARWKHNLTGSWSLGAARAALTNRFTTGYNDYDRDTHSRVAS
YSVWDLSAGYTFNKVLDVDAGMKNVFDRNPPFSNQAYNFQSGYDPRYTDPLGRTLFARMT
YHF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgaacactccacgcttcacgctcaaacctttggtggcaacgatgtctcgccac
cgtttcgttccgctgtatctggtggccatggggatgggcgccgggaccgtgcaagcggcc
gaggacgacaacagcgccacgccggcagccgctgtggtggcggcgccgaccacgcaactg
caacgggtcgaagtgaccggttcggcgattcgccgggtcgatgcggaaacggcggtgccg
atcaccattctcaaggctgaagagctgcgcaaacagggcgtgaccaccaccgccgaactg
gtccagcgcatcaccggcagccagtcgatcaacaacagcgccggctccgtcggcgcggcc
actggcggtgcgtcgtttgccgacatgcgcggcatcggcgcgaacaagacgctggtgctg
ctcaacggtcgacgcctggccaacaatgccctgtcggggaccaactcggccggcggcgcg
gtggacctgaacatgatcccgttcgccgccatcgagcgcgtggaagtgctgcgcgacggc
gcctcggccctgtacggcaccgacgccatcggcggtgtgatcaacttcatcaccaagaaa
tcccttaccgacggcgcgttgaccctcggtggcgaaacgccgacccacagcggtggcggc
gcgaccaaggacatgagcgccagttggggctacggcgatctggaagaagaccgcttcaac
gtcctcggcgtgttcaactacaacaagcagcagaacctcgacgccaacgaccgctccttc
gccaccgactacgcgcccggtcgcggtctcgatcagacctccggcaccgcgttccccggc
aactacagccagaacggcaacgccaccaacccgttggcgaacagcaactgcaacggcccc
aacctgatcgcccgcgacggcttgtgccgcttcagcacccgtgaattcatcgacctggtg
ccacagaccgagaagacctcgttcttcggaaagaccactgccaagctcggcgatgatcac
aatgccaaccttgaatatttctggtcgcgcaacaacaacgccgtcgccgtcggcccggcg
ccactgactggtctgagcctggattcatcgtcgccctactaccccggcaacggcatcacc
ccggcgccgaccgatttcgccctcgacccgacgcagccggtcgatgtgaactggcgtgaa
accgctgccggcccgcgtgaatcgaaagaccagaacaccagccagcgctttctgctgagc
ttcgatggtctggttggcggctgggattacaacgtcggcgcctcgtacaaccagaacaaa
atcgtctccagcgtcaccagtggctatgtcagcgatcaggcgatgattgacggcctggcc
agcggtctgctcaacccgttcggcccgcagaccgctgccggccagcagtacatcgacgcc
gccgcgtaccacggcgcctactccacagccgtgggccgcgtcgccggtttcgatggccgc
gtgagccgtgaaatcggcgactggttcggcgcaggtccgtccggtctggcgctgggcggc
gagtaccgcaaggagaaattccatcaggacttcgagtcgttcgccggcgacatccagagc
ctcggcatcgacccggccggtagcgtcgagggcgaccgcagcgtcaaggccgcctatgcc
gaactcaacgtgccggtgctcgacagccttgaattgtccgccgctgtgcgccacgacaaa
tacagcgacttcggcagcaccaccaacccgaaatactcgttccgttatcagccgttgaaa
gagctggtggtgcgtggcgcctacagcgaaggtttccgcgcgccgtcgctgtatgaactg
tattcgccgcgcagcatcaccttcacccagggtttctacaacgatcccgtgctgtgtacc
ggcggcgtggtgcaaccaggcggtaacggcgggcgtgattgcggtcagcaattcctcaac
cagattggcggcaacgaggatctggccccggagaaggcgcgcaacgtgacgttgggcttc
gtctaccagccgatcagcaacctctcggtgggtctggatttctggtggattcacatctcc
aaccagatccagccgttcccggaatccaccgtgttcgatcaggccggatcctacccggac
cgcttcgtgcgcaacgccgacggcacgctcaactacatcgtcaccggcaacgccaacctc
ggcatcgtcgaaaccaacggtgtcgatgtgtcgctcgactatcgcttcccgaacacgccg
tacggtcagtttggtctcggcctgcaaggcacctatgtcgacgagtacgacttccagagc
actatcaaaggcccgttcaccgacaaggtcggcgactttcagggtgacggcgtgatcgcg
cgctggaagcacaacctcaccggcagctggagcctcggtgcggcgcgagcagcgctgacc
aaccgcttcaccaccggttacaacgattacgaccgcgacacccattcgcgcgtggcctcg
tattcggtgtgggacctgtcggccggctacaccttcaacaaagtgctcgacgtcgatgcc
gggatgaagaacgtgttcgaccgcaacccgccgttctccaaccaggcttacaacttccag
agcggctatgacccgcgctacaccgacccgctgggccggacattgtttgcgcgcatgact
taccacttctaa
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