Pseudomonas atacamensis: JWU58_10675
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Entry
JWU58_10675 CDS
T07336
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00020
Citrate cycle (TCA cycle)
pata00480
Glutathione metabolism
pata00720
Other carbon fixation pathways
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata01120
Microbial metabolism in diverse environments
pata01200
Carbon metabolism
pata01210
2-Oxocarboxylic acid metabolism
pata01230
Biosynthesis of amino acids
pata04146
Peroxisome
Module
pata_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pata_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JWU58_10675
09102 Energy metabolism
00720 Other carbon fixation pathways
JWU58_10675
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JWU58_10675
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JWU58_10675
Enzymes [BR:
pata01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
JWU58_10675
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
QSL89729
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All DBs
Position
complement(2340543..2342768)
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AA seq
741 aa
AA seq
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MPTRSKIIYTFTDEAPALATYSLLPIIEAYTASADIAVETRDISLAARILASFPEQLGDK
AVADHLAELGDLAVTPEANIIKLPNISASVPQLQAAIKELQAQGYNLPDYPETVTSDADK
DAKARYDKVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAKDSKSHVAHMSTGD
FYGSEKAVLIDAADAVKIELIAKDGAATVLKEKTTVQAGEILDCAVMSKNALRAFIAAEI
ESAKAQGVLLSVHLKATMMKVSDPIMFGQIVAEFYKDALTKHADVLNQIGFNLNNGIGDL
YARIKALPAEQQAQIEADIAAVYAVRPSLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDCKANGAFDPTTMGSVPNVGLMAKKAEEY
GSHDKTFQIKADGVVRVTDSKGKLLMEQAVEAGDIFRMCQTKDAPIQDWVKLAVNRARAS
STPAIFWLDPMRAHDGVVIEKVQAYLKDHDTSGLDIQIMAPVDAMKYTLQRTREGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLVEENFLR
WDSLGEFLALAASLEHLGVNYNNPKALVLSKTLDQATGQFLDNNKSPSRKVGNIDNRGSH
FYLAMYWAQALAAQTEDAALQAQFATLAKTLTENEATIVAELNAVQGKPVDIGGYYHADA
ELISKAMRPSATFNAAIAALV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgctcgaagatcatctataccttcaccgacgaagctcctgccctcgccacc
tattccctgctgccgatcatcgaggcttacaccgcctcggccgatatcgccgtggaaacc
cgcgatatctctcttgcagcgcgcatcctggcaagcttccccgagcaactgggcgacaaa
gccgtagccgaccacctcgccgaactgggcgacctggccgttacgcctgaagccaacatc
atcaagctgccgaacatcagtgcttcggtgccacagctgcaagccgcgatcaaagagctg
caggcgcagggctacaacctgccggactacccggaaaccgtgaccagcgacgccgacaaa
gacgccaaggcgcgttacgacaaggtcaagggcagcgccgtgaacccggttctgcgtgaa
ggcaactccgaccgccgcgctccgctgtcggtgaagaactacgcgcgcaagcacccgcac
aaaatgggcgcctgggccaaggactccaagtcccacgtcgcacacatgagcaccggcgat
ttctacggcagcgaaaaagctgtcctgatcgacgccgctgacgctgtgaagatcgaactg
atcgccaaggacggtgctgccaccgttctgaaagaaaaaaccaccgttcaggctggcgag
atcctcgactgcgccgtgatgagcaaaaacgccctgcgtgcgttcatcgctgccgaaatc
gaaagcgccaaggcccagggcgtgctgctctcggttcacttgaaagcgaccatgatgaag
gtctccgacccgatcatgttcggccagatcgttgccgagttctataaagacgcactgacc
aagcacgctgacgtgctgaaccagatcggcttcaatctgaacaacggcatcggcgatctg
tacgcgcgcatcaaggccctgccggccgagcagcaagcgcagatcgaagccgatatcgca
gcggtctacgccgttcgtccgtcgctggcgatggtcaactccgacaaaggcatcaccaac
ctgcacgtgccgagcgacgtcatcgttgacgcctcgatgccagcgatgatccgtgactcc
ggcaagatgtggggcaccgacggtcagctgcacgacaccaaggctgtaatcccggatcgt
tgctacgcgaccatctaccaggcggtgatcgaagattgcaaagccaatggcgctttcgat
ccgaccaccatgggcagcgtgccgaacgtcggcctgatggcgaagaaagccgaagagtac
ggctcccacgacaagaccttccagatcaaggctgacggcgttgttcgcgtcaccgacagc
aaaggcaagctgctgatggaacaggctgtcgaagccggcgacatcttccgcatgtgccag
accaaagacgcgccgatccaggactgggtcaaactggccgtcaaccgtgctcgcgcgagc
agcacgccggcgatcttctggctcgacccgatgcgcgctcacgatggcgtggtgatcgag
aaggttcaggcctacctgaaggatcacgacaccagcggtctggacatccagatcatggcg
ccggtcgacgcgatgaagtacaccctgcagcgcacccgcgaaggcaaggacaccatttcg
gtgaccggcaacgtactgcgcgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaagatgctgtcgatcgtaccgctgatgaatggcggtggtctgttcgaaacc
ggcgccggcggttcggcgccgaagcacgtgcagcaactggttgaagaaaacttcctgcgc
tgggattcgctgggtgagttccttgccctcgccgcttcccttgagcacctgggtgtgaac
tacaacaacccgaaagcactggtgctgtcgaaaaccctggaccaggccaccggtcagttc
ctcgacaacaacaagtcgccatcgcgcaaagtcggcaacatcgacaaccgcggcagccac
ttctacctggcgatgtactgggctcaggccctggccgcccagactgaagacgctgcactg
caagcgcagttcgcgactctggccaaaaccctgaccgagaacgaagcgaccatcgttgcc
gagctcaacgccgtgcagggcaagccagtcgacatcggcggttactaccacgccgacgcc
gagctgatcagcaaggccatgcgcccaagcgcaaccttcaacgcggcgattgctgcgctg
gtttaa
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