Pseudomonas atacamensis: JWU58_11290
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Entry
JWU58_11290 CDS
T07336
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pata01002
]
JWU58_11290
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pata01011
]
JWU58_11290
Peptidases and inhibitors [BR:
pata01002
]
Cysteine peptidases
Family C82
JWU58_11290
Peptidoglycan biosynthesis and degradation proteins [BR:
pata01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JWU58_11290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QSL89848
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All DBs
Position
2462515..2464131
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AA seq
538 aa
AA seq
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MFKKYACYLSICLLAAPFVACADEPLPPLETLPTPETQLPVEPRSPLQAVLISLAQSCPA
IAPRLNGPALSQLQAFYEQQDWMPVWASESARLPALRAQLQLLADDGLNPNRYAVATTPP
QDGELCADIDISRNYLQALQDLHYGRLLQSHFEPLWRVDGPPTDRQAQLLSIAVPGMNDI
AAAFDLARPHLPQYQSLRQLYAAQRLQAPPQWQPVGNGPLLRPAMEDPRVPELARRLYSE
GYLAHALVTPDNAYDDVLVEAVKHFQASHSLQADGVVGPGTIAELNISPLTRRDQLRVNL
ERFRWMAQDMEPSGLVVNVAAAELTLYQGGQPVWQTRTQVGRAERQTPLLKSRVTRLTLN
PTWTVPPTIWKEDKLPEIRKDQTFLSRQNLQVLDANGQPLAAADIDWDNPGNILLRQDAG
PRNPLGQMVIRFPNPFSVYLHDTPSKALFDKGPRAFSSGCVRVEHPLQLRDLLLSPAEKA
RTETLLATGTTHEFRLSAPVPILMTYWTAQVDSSGHVRYAPDIYSHDSALLAGLDRAH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaagtacgcatgctacttgagcatttgtttgctcgctgcgccgtttgtcgct
tgcgccgatgagccgctgcccccgctcgaaaccctgccgacgcctgaaacgcaattgccg
gtcgagccgcgcagcccgttgcaggcggttttgatcagcctggcgcagtcgtgcccggcc
atcgctccgcgtctcaatggcccggcgttgagccaattgcaggcgttttatgaacagcag
gactggatgccggtgtgggcgagtgagtcggcacgcttgccggcattgcgcgcgcaattg
cagctgctggccgatgatgggttgaatccgaatcgctacgccgtggccactacgccgccg
caggatggcgagttgtgcgccgacatcgacatcagccgcaactacctgcaggccttgcag
gatctgcattacggccgtctgttgcaatcgcatttcgaaccgctgtggcgtgtcgacggc
ccgccgaccgatcgtcaggcgcaactgctcagtattgccgtgccgggcatgaacgatatt
gctgcggcgttcgacctggcgcgtccgcatctaccgcaatatcaaagcctgcgtcagctg
tacgccgcgcaacgcttgcaagccccgccgcaatggcagccggtgggcaacggcccgttg
ctgcgtccggcgatggaagacccgcgcgtgccggaactggcccgacgcttgtacagcgaa
ggttatctggcacacgcactggtgacaccggacaacgcctatgatgacgtgctggtggag
gcagtgaagcattttcaggccagccattcgttgcaggctgacggcgtggtcgggccgggc
actattgccgagctgaacatcagcccgctgacccgtcgcgatcagttgcgggtcaatctg
gaacgtttccgctggatggcccaggacatggaacccagcggtctggtggtgaatgtcgcg
gccgctgagctgacgctgtatcagggcggtcaaccggtgtggcagacccgcacccaggtc
ggccgcgcggaacgccagacgccgctgctcaaatcccgcgtcacccgcctgacgctgaac
ccgacctggaccgtaccgccgaccatctggaaagaagacaagctgccggaaatccgcaag
gaccagactttcctcagccgccagaacctgcaagtgctcgatgccaacggtcagcctctg
gcggcagcggacatcgactgggacaaccccggcaacatcctcctgcgtcaggacgccggc
ccccgcaatccgctgggccaaatggtcatccgtttccccaacccgttctcggtctacctg
cacgacacgccgagcaaggcgctgtttgacaaaggcccacgggcgttcagctccggttgt
gtgcgcgtcgagcacccgctgcaactgcgcgatctgctgctgtccccggcagaaaaagct
cgcaccgagactttgctggcaaccggcaccacccatgaatttcgcctgtcggcgccggtg
ccgatcctgatgacctactggacggcgcaagtcgacagcagcggccatgtgcgttatgcg
ccggacatctacagccacgacagcgcattgctggcggggctggatcgggcgcactaa
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