Pseudomonas atacamensis: JWU58_12025
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Entry
JWU58_12025 CDS
T07336
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pata03000
]
JWU58_12025
Transcription factors [BR:
pata03000
]
Prokaryotic type
Helix-turn-helix
GntR family
JWU58_12025
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
HTH_27
HTH_Crp_2
Fe_dep_repress
TrmB
HTH_CodY
HTH_11
HTH_36
DUF6880
HTH_5
HTH_41
GMT-wHTH
Ribosomal_S25
MarR
HTH_29
HTH_28
HTH_23
PLU-1
FliX
TFIIE_alpha
HTH_54
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QSL89983
LinkDB
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Position
complement(2613372..2614136)
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AA seq
254 aa
AA seq
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MKRQPLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLMPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLDDAVDIYELRCVLEGLIVQLFTLRAKAKDIKALE
KALDDNRKALKDGELQQVIDSVQGFYDVLLEGSGNHVAATQLRQLQARISYLRATSVSQE
NRRGASNHEMEKMVEAIKSGDPLAAHQACVDHVRAAAAVALDYLKRKQEETGVAVKGTPA
ITLPIALKEPRIGQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccagccactcgacgacagcttcaaggtcaatcgcaaccccgttaccctgcgc
gaaatcgtgctggacaaactgcgtagcgcgatcatgaatttccagctcatgccaggtgat
cgtctggtcgaacgcgacctgtgcgatcgcctcggtgtcagccgcacttcggtgcgcgaa
gccttgcgtcacctcgaatccgaaggtctcgtcgaattcgccgatgccaaaggcccgcgc
gtagccatcatcaccctcgacgacgccgtcgatatctacgaactgcgttgcgtgctcgaa
ggcttgatcgtgcagttgttcaccctgcgtgccaaagccaaggacatcaaggccctggaa
aaagccctcgacgacaaccgcaaggcgctcaaggacggcgagctgcaacaggtcatcgac
tcggtgcagggcttctacgacgtgctgctcgaaggctcgggcaaccatgtcgccgccacc
cagctgcgccagttgcaggcgcgcatcagttacttgcgggccacttcggtgtcgcaggaa
aaccgacgcggcgcgagtaatcacgagatggaaaaaatggtcgaggcgatcaagagcggc
gatccgctggcggcgcatcaggcgtgcgtagatcacgtccgcgctgcggctgccgtggcc
ctcgattacctcaagcgcaagcaggaagaaaccggcgtcgccgtcaaaggcaccccggcg
atcaccctgccgatcgcgctgaaagaaccccgtataggtcaatga
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