KEGG   Pseudomonas atacamensis: JWU58_12120
Entry
JWU58_12120       CDS       T07336                                 
Name
(GenBank) AAA family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pata  Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:pata00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pata03400]
    JWU58_12120
DNA repair and recombination proteins [BR:pata03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JWU58_12120
    Archaeal homologous recombinant proteins
     JWU58_12120
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 AAA_21 SMC_N AAA_15 Vps5 ABC_tran nSTAND3 MMR_HSR1 RsgA_GTPase AAA_22
Other DBs
NCBI-ProteinID: QSL90002
LinkDB
Position
complement(2632872..2636513)
AA seq 1213 aa
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQATGVTPLAPEARAELDERF
NTAQQQMKAQQAQLKQLEQQHSWLKDLRQLQEAQQAASEQLQTAQQQWQALAGERVKLTR
LEQLGPQRHQFARKAELDALLTPLATQIAAHTQQHAALGERQTELEQNLDAAKVALSAAQ
QRQSENAPLLRQAFEEQSTLARLIKDTASSAEARQAAEQAFKDGQSAIQALQEKQTEVAA
RLQHIAAELEQSAHLAPLSDAWSAYRDRLQQLMLIGNRLNKGQSELASLAQNAAHSAEQL
ASHKQQLEVLFKEAGAEPDAVAEQIGLLGTLLQDNRKQLRAIEDLSRLWATQQDLDKRSA
ELQQRQLDAQQQRERLTQDGVKTKAELTVAEQTLSVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQANAQQVVDQLKEKLSELRGEVGGVIAQ
QKELLQQQEQLAAQQQALAPSLDAHPLAAQLFNQDADKRDAWLSRQTEQLNQSITQDEQR
QSALLTLQQDAARLSQQLRQAEVAHQQAAQQLSHQQHELNSDRQRLEEELSAFGPLLPAD
TLEALRLEPAATFMQLDRQIAERLTQLEQQKEELSEQQQRQQTLEKEQDRQQLRTQQLHS
AEQQFMALTEQQQGCQEKLAQLLGEHDSAEHWQQQLEHAVEQARVAETSTAEELQSVRTQ
LVQIAAELKAQQERLQALQAEDQALAGKIADWRASHPELDDGGLEDLLRFDDAQVAELRQ
TLQHNEKAIEQAQVLLQERDQRLLDHQARQDGNLDAEQLDSALAELQNQFAVSEQQCAEL
RAEQVEDQRRQNANQALAQQIADAYAEYQRWARLSALIGSATGDTFRKIAQAYNLDLLVH
HANAQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVI
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgaaaattctcgccattcgtttgaagaacctcgcctcgctggccggtccgttcgagatc
gatttcaccgctgaaccgctggccagcgccggtctgttcgcaatcaccggcccgaccggc
gccggcaaaagcacgttgcttgatgccttgtgtctggcactgttcggcgctgtaccgcgt
ctgaacaacaccggccgagatgcgaaagtcccggatgctgacggtgaaatcgccactggc
gacccgcgcaccttgctgcgacgcggcaccggtgaaggctatgccgaagtggattttgtc
ggcgtcgatggccgccgctatcgcgcgcgctgggaagccaaccgtgctcgcgagaaggct
ggcggcaagctccaggccagtcggcagagcctgcgcgacatcgatcaggatcaactgctc
gccagccagaaaggcgaatacaaaactcagctggaagccgctctgggtctcaactttgaa
cagttcactcgcgctgtgctgctggcgcagagtgagttcagcgcgttcctcaaggccgat
gacaacgaccgcagtgaactgctggaaaaactcaccgacaccgcgctctacacccgcctc
ggccgccgcgccttcgacaagaccaaagaggcccgcgaagcgcacaagctgttgcaggat
caggctaccggcgtgacgcctttggcgccggaagcgcgcgccgaactcgacgagcgtttc
aacaccgcgcagcaacagatgaaggcgcaacaggcgcagctcaaacaacttgagcaacaa
cacagttggctgaaggatttgcgtcagttgcaggaagcgcagcaagcggccagcgaacaa
ctgcaaaccgcgcaacagcaatggcaggcactggccggcgagagggtaaaactgacgcgt
ctggaacagcttggcccgcagcgtcatcagttcgcgcgcaaggccgagctcgatgcgctg
ctgacgccactggcgacgcagattgccgcgcacacccaacaacacgcggcgctgggcgaa
cgccagacggagctggaacagaacctcgacgcagcgaaagtcgccctgagcgcagcgcaa
caacgccagagcgaaaatgcgccgttgctgcgtcaggcattcgaagagcaaagcaccctc
gcccgcctgatcaaggacaccgccagcagtgccgaagcccggcaagcggccgagcaagcg
ttcaaggatggccagagcgcgattcaggctttgcaggaaaagcagactgaagtcgccgcg
cgtttgcaacacatcgccgctgagcttgagcagagtgcccatctggcgccgttgagcgat
gcctggagcgcctatcgcgatcgtctgcaacagctgatgctgatcggcaaccgcttgaac
aagggccagagcgaactggcttccctcgcacagaacgccgcgcacagtgctgagcaactg
gcctcgcacaaacagcaactggaagtgctgttcaaagaagccggcgcagagccggacgca
gtcgccgaacagatcggcctgcttggcaccttgctgcaggacaaccgcaaacagctgcgc
gcgatcgaagacctgtcgcgcctgtgggcgactcagcaggatctcgacaagcgcagcgcc
gagttgcaacaacgccagcttgacgcgcagcagcaacgtgaacgtctaacccaggacggg
gtgaaaaccaaggccgaactgaccgtcgccgagcagaccctcagcgtcactcgcgagctg
cttgaacgtcagcggctggcgcgcagtgccagtgtcgaagagttgcgcgcgcagttgcag
gacgatcagccctgcccggtctgcggcagcaacgagcatccctatcaccagcccgaagcg
ctgttgcaaagccttggccgtcacgatgaaagcgaacaggccaacgcccagcaagtggtc
gatcagctcaaggaaaaactgagcgaactgcgcggcgaagtcggtggcgtgatcgcacaa
cagaaagaattgctgcagcaacaggaacaactcgcggcgcagcaacaagccttggccccg
agcctcgacgcgcatccgctggccgcgcaactgttcaatcaggacgccgacaaacgcgac
gcctggctcagccgccagaccgagcagttgaaccagagcatcactcaggacgaacaacgc
caaagtgcgctgctcaccttgcaacaggacgctgcgcgcttatcgcaacaattgcgtcag
gctgaagtggcgcatcagcaagcggcgcaacagctgagccatcagcagcatgaactcaac
agtgatcgtcagcgccttgaggaagaactcagcgcgttcggcccgctgctgcccgccgac
acacttgaggcattgcgcctggagccggcggcaacgttcatgcagctggaccggcagatc
gccgagcgtttgacccagctcgaacagcaaaaggaagagctgagcgaacagcagcaacgc
cagcagacgttggagaaagaacaggatcgtcaacagctgcgcactcagcaactgcacagc
gccgagcaacaattcatggcgctgaccgagcaacagcaaggctgtcaggaaaagctcgcg
cagttacttggcgagcacgacagcgccgagcactggcagcagcagctggaacacgcggtg
gaacaggcgcgcgtcgccgaaaccagcaccgctgaggagctgcaaagtgtgcgcacgcaa
ctggtgcagatcgccgctgagctcaaggcccaacaggaacgcctgcaagcactgcaagcc
gaagaccaggcactcgccggcaagatcgccgattggcgcgccagccatccggaactggat
gacggcggcctcgaggacttgctgcgcttcgacgacgcgcaagtcgccgaactgcgtcag
acccttcagcacaacgaaaaagccatcgaacaggcccaggtcctgttgcaggagcgcgat
cagcgtctgctcgatcaccaggcccggcaggacggcaatcttgacgccgaacagctggac
agcgccctcgctgagctgcagaaccagttcgccgtcagcgaacagcagtgcgccgagctg
cgcgccgaacaggtggaggaccagcgccggcagaacgccaatcaggcgctggcccagcag
atcgccgacgcctatgccgagtaccagcgctgggcgcggctcagtgccttgatcggctcg
gccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcat
cacgccaacgcgcagctgcgccaactggtcaaacgctatcgcctcaaacgcggcggcagc
atgctcggcctgctggtgatggacacggaaatgggcgacgaactgcgctcggtgcattcg
ctttccggcggcgagacgttcctcgtatcactcgcccttgcgctgggtctggcctcgatg
gcgtcgagcacgctgaaaatcgagtcgctgtttatcgatgaaggctttggcagcctcgat
ccggaatccttgcaactggccatggacgcgctcgatggcttgcaggcgcagggacgcaag
gtggcggtgatttcccatgtgcaggaaatgcacgagcggattccggtgcagattcaggtg
cggcgccagggcaatggtttgagcacgctggaggtgatatga

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