Pseudomonas atacamensis: JWU58_12120
Help
Entry
JWU58_12120 CDS
T07336
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pata03400
]
JWU58_12120
DNA repair and recombination proteins [BR:
pata03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JWU58_12120
Archaeal homologous recombinant proteins
JWU58_12120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
AAA_15
Vps5
ABC_tran
nSTAND3
MMR_HSR1
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QSL90002
LinkDB
All DBs
Position
complement(2632872..2636513)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQATGVTPLAPEARAELDERF
NTAQQQMKAQQAQLKQLEQQHSWLKDLRQLQEAQQAASEQLQTAQQQWQALAGERVKLTR
LEQLGPQRHQFARKAELDALLTPLATQIAAHTQQHAALGERQTELEQNLDAAKVALSAAQ
QRQSENAPLLRQAFEEQSTLARLIKDTASSAEARQAAEQAFKDGQSAIQALQEKQTEVAA
RLQHIAAELEQSAHLAPLSDAWSAYRDRLQQLMLIGNRLNKGQSELASLAQNAAHSAEQL
ASHKQQLEVLFKEAGAEPDAVAEQIGLLGTLLQDNRKQLRAIEDLSRLWATQQDLDKRSA
ELQQRQLDAQQQRERLTQDGVKTKAELTVAEQTLSVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQANAQQVVDQLKEKLSELRGEVGGVIAQ
QKELLQQQEQLAAQQQALAPSLDAHPLAAQLFNQDADKRDAWLSRQTEQLNQSITQDEQR
QSALLTLQQDAARLSQQLRQAEVAHQQAAQQLSHQQHELNSDRQRLEEELSAFGPLLPAD
TLEALRLEPAATFMQLDRQIAERLTQLEQQKEELSEQQQRQQTLEKEQDRQQLRTQQLHS
AEQQFMALTEQQQGCQEKLAQLLGEHDSAEHWQQQLEHAVEQARVAETSTAEELQSVRTQ
LVQIAAELKAQQERLQALQAEDQALAGKIADWRASHPELDDGGLEDLLRFDDAQVAELRQ
TLQHNEKAIEQAQVLLQERDQRLLDHQARQDGNLDAEQLDSALAELQNQFAVSEQQCAEL
RAEQVEDQRRQNANQALAQQIADAYAEYQRWARLSALIGSATGDTFRKIAQAYNLDLLVH
HANAQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVI
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgccattcgtttgaagaacctcgcctcgctggccggtccgttcgagatc
gatttcaccgctgaaccgctggccagcgccggtctgttcgcaatcaccggcccgaccggc
gccggcaaaagcacgttgcttgatgccttgtgtctggcactgttcggcgctgtaccgcgt
ctgaacaacaccggccgagatgcgaaagtcccggatgctgacggtgaaatcgccactggc
gacccgcgcaccttgctgcgacgcggcaccggtgaaggctatgccgaagtggattttgtc
ggcgtcgatggccgccgctatcgcgcgcgctgggaagccaaccgtgctcgcgagaaggct
ggcggcaagctccaggccagtcggcagagcctgcgcgacatcgatcaggatcaactgctc
gccagccagaaaggcgaatacaaaactcagctggaagccgctctgggtctcaactttgaa
cagttcactcgcgctgtgctgctggcgcagagtgagttcagcgcgttcctcaaggccgat
gacaacgaccgcagtgaactgctggaaaaactcaccgacaccgcgctctacacccgcctc
ggccgccgcgccttcgacaagaccaaagaggcccgcgaagcgcacaagctgttgcaggat
caggctaccggcgtgacgcctttggcgccggaagcgcgcgccgaactcgacgagcgtttc
aacaccgcgcagcaacagatgaaggcgcaacaggcgcagctcaaacaacttgagcaacaa
cacagttggctgaaggatttgcgtcagttgcaggaagcgcagcaagcggccagcgaacaa
ctgcaaaccgcgcaacagcaatggcaggcactggccggcgagagggtaaaactgacgcgt
ctggaacagcttggcccgcagcgtcatcagttcgcgcgcaaggccgagctcgatgcgctg
ctgacgccactggcgacgcagattgccgcgcacacccaacaacacgcggcgctgggcgaa
cgccagacggagctggaacagaacctcgacgcagcgaaagtcgccctgagcgcagcgcaa
caacgccagagcgaaaatgcgccgttgctgcgtcaggcattcgaagagcaaagcaccctc
gcccgcctgatcaaggacaccgccagcagtgccgaagcccggcaagcggccgagcaagcg
ttcaaggatggccagagcgcgattcaggctttgcaggaaaagcagactgaagtcgccgcg
cgtttgcaacacatcgccgctgagcttgagcagagtgcccatctggcgccgttgagcgat
gcctggagcgcctatcgcgatcgtctgcaacagctgatgctgatcggcaaccgcttgaac
aagggccagagcgaactggcttccctcgcacagaacgccgcgcacagtgctgagcaactg
gcctcgcacaaacagcaactggaagtgctgttcaaagaagccggcgcagagccggacgca
gtcgccgaacagatcggcctgcttggcaccttgctgcaggacaaccgcaaacagctgcgc
gcgatcgaagacctgtcgcgcctgtgggcgactcagcaggatctcgacaagcgcagcgcc
gagttgcaacaacgccagcttgacgcgcagcagcaacgtgaacgtctaacccaggacggg
gtgaaaaccaaggccgaactgaccgtcgccgagcagaccctcagcgtcactcgcgagctg
cttgaacgtcagcggctggcgcgcagtgccagtgtcgaagagttgcgcgcgcagttgcag
gacgatcagccctgcccggtctgcggcagcaacgagcatccctatcaccagcccgaagcg
ctgttgcaaagccttggccgtcacgatgaaagcgaacaggccaacgcccagcaagtggtc
gatcagctcaaggaaaaactgagcgaactgcgcggcgaagtcggtggcgtgatcgcacaa
cagaaagaattgctgcagcaacaggaacaactcgcggcgcagcaacaagccttggccccg
agcctcgacgcgcatccgctggccgcgcaactgttcaatcaggacgccgacaaacgcgac
gcctggctcagccgccagaccgagcagttgaaccagagcatcactcaggacgaacaacgc
caaagtgcgctgctcaccttgcaacaggacgctgcgcgcttatcgcaacaattgcgtcag
gctgaagtggcgcatcagcaagcggcgcaacagctgagccatcagcagcatgaactcaac
agtgatcgtcagcgccttgaggaagaactcagcgcgttcggcccgctgctgcccgccgac
acacttgaggcattgcgcctggagccggcggcaacgttcatgcagctggaccggcagatc
gccgagcgtttgacccagctcgaacagcaaaaggaagagctgagcgaacagcagcaacgc
cagcagacgttggagaaagaacaggatcgtcaacagctgcgcactcagcaactgcacagc
gccgagcaacaattcatggcgctgaccgagcaacagcaaggctgtcaggaaaagctcgcg
cagttacttggcgagcacgacagcgccgagcactggcagcagcagctggaacacgcggtg
gaacaggcgcgcgtcgccgaaaccagcaccgctgaggagctgcaaagtgtgcgcacgcaa
ctggtgcagatcgccgctgagctcaaggcccaacaggaacgcctgcaagcactgcaagcc
gaagaccaggcactcgccggcaagatcgccgattggcgcgccagccatccggaactggat
gacggcggcctcgaggacttgctgcgcttcgacgacgcgcaagtcgccgaactgcgtcag
acccttcagcacaacgaaaaagccatcgaacaggcccaggtcctgttgcaggagcgcgat
cagcgtctgctcgatcaccaggcccggcaggacggcaatcttgacgccgaacagctggac
agcgccctcgctgagctgcagaaccagttcgccgtcagcgaacagcagtgcgccgagctg
cgcgccgaacaggtggaggaccagcgccggcagaacgccaatcaggcgctggcccagcag
atcgccgacgcctatgccgagtaccagcgctgggcgcggctcagtgccttgatcggctcg
gccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcat
cacgccaacgcgcagctgcgccaactggtcaaacgctatcgcctcaaacgcggcggcagc
atgctcggcctgctggtgatggacacggaaatgggcgacgaactgcgctcggtgcattcg
ctttccggcggcgagacgttcctcgtatcactcgcccttgcgctgggtctggcctcgatg
gcgtcgagcacgctgaaaatcgagtcgctgtttatcgatgaaggctttggcagcctcgat
ccggaatccttgcaactggccatggacgcgctcgatggcttgcaggcgcagggacgcaag
gtggcggtgatttcccatgtgcaggaaatgcacgagcggattccggtgcagattcaggtg
cggcgccagggcaatggtttgagcacgctggaggtgatatga
DBGET
integrated database retrieval system