Pseudomonas atacamensis: JWU58_12125
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Entry
JWU58_12125 CDS
T07336
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pata03400
]
JWU58_12125
DNA repair and recombination proteins [BR:
pata03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JWU58_12125
Archaeal homologous recombinant proteins
JWU58_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QSL90003
LinkDB
All DBs
Position
complement(2636510..2637754)
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AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLHLAQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLLPLPNAQGEIAAWCLALPFLRPAEVTGAHLGDNYLRGIGQVHEWLIAAANAKRQPG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGESISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDVVLDGETLVSVEPKLIPRSVNLQRIGPAPLAEILLQL
ADLPNIDLLAETQRQPWLEVRVRLDEPQPDLRHQVETALQGKAVRLVRIAAEYAGNRGVD
GSEDGSTLIELDQLTPQELFSRAWLDNYGSEVDEQTLKDFAELLQDVQLEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcaccttgggcaaaacctgcacggccaggagcgc
gatttcgagcacgcgtgttttctcgaatggctgctgcgccagttgcacttggcgcagccg
gatgtgctgctgatcgccggagacatcttcgatacggtcaatccgccggtcaaagcgcag
gaacgcctctacgatttcatcgtcagcgctcacgaacagcagccgctgctgaccatcgtg
atgattgccggcaaccatgattcgggctcgcggatcgagctgccggcgccgttgatgcgg
cgtttgcgtactcacgcgttgggtcgggtgctgtggctggatgacgggcagctcgacgcc
gagcgcttgttgctgccgctgccgaatgcgcagggagaaatcgccgcgtggtgtctggcg
ctgccgttcttgcgcccggcggaagtcactggcgcgcatctgggtgacaactatctgcgc
ggcatcggtcaggtacatgagtggctgatcgcggcggcgaatgccaagcgccagcccggg
caggcgttgatcgctatcagccacgcgcacatggccgggggctcggtgtcggaggattcc
gagcgcagcctgatcatcggcaatgccgaagcgctgcccgccagcctgttcggcgaaagc
atcagttacgtcgccctcggccatttgcacaagccgcagaaggtcaacggcgaggagcgc
atccgctacagcggctcgccgattccgctgtcgttctccgaaatcggttatcagcatcag
attctcgatgtggtcctggacggtgaaacactggtcagcgtcgagccgaaactgatcccg
cgctcggtcaatctgcagcgcatcggcccggcaccgctggccgagattctgctgcaactg
gctgacctgccgaacatcgatctgctcgccgaaacccagcgccagccatggctcgaagtg
cgcgtgcgcctggatgagccgcaaccggatctgcgccatcaagtggaaaccgcactgcaa
ggcaaagccgtacgactggtgcgcatcgccgctgaatacgccggcaatcgcggcgtcgat
ggcagcgaggacggcagcacgctgatcgaactcgaccaactcaccccgcaggaactgttc
agccgcgcctggctcgacaattacggcagcgaggtcgacgagcagacgctcaaggacttc
gccgaactgctgcaggacgtgcaactggagggcgagcagccatga
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