Pseudomonas atacamensis: JWU58_13580
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Entry
JWU58_13580 CDS
T07336
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_13580
Transporters [BR:
pata02000
]
Other transporters
Pores ion channels [TC:
1
]
JWU58_13580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
QSL85239
LinkDB
All DBs
Position
complement(2984798..2987200)
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AA seq
800 aa
AA seq
DB search
MPAVFPGRLRPLLQLSLLLSLSASPVLIQSSWADDGSRRSYQVPAGSLSAALTRFAGLAG
VNLSVDPALVSGRNSSGLSGEFGVEEGFSRLLLGSGLQLQPVGDQAYTLVPAAQGSTLQL
APTSILGASGSADADVFAGGQVARRGSQGLLGSRDFMETPFSMTTYTSETVKNQQARTLG
DLIGSDPSVRATNPAGGRYEQFTIRGFSLFNSDVAYNGLYGVLPTYTIDMEMADRVDILK
GPSQLINGISPRGSVGGGINVVPKRATDKPITSLTANYASNNQVGGAVDVGRRFGDENQF
GLRFNGVKQSGDTEWDHQSVDRDMAVLGMDFRGERLRLSTDIGHTERDTDAPQERVQVAA
NAKVPNANDVRDNYAQPWSRARTKDTFGTVNGEFDVSDSVMLYGGVGARKSNHDFLRHAV
SVTNDAGDFSVQPRDFTRDENVRTATAGVRNWFQTGPVSHEVNLAANYFYMDFENGGARY
AAGRSNLYDPVEIARPGTPTRNDAKVYTENRFSGVALSDTLGFFDDRLLLTLGARWQRVK
VDDWSDGIKGDTAYDEEKVSPSGGILFKATDKLSLYANYMEGLSQGKIAPSTSINEDEIF
PPFISRQIEVGAKYDAGSYALTAAVFRIKQPAYETNATTRVFGPNGKRENNGVELSMFGE
PLKGFRFLGGVMYIDSELTHTTNGTFDGNRAPATPKYNVNLGAEWDVPTVQGLTLTSRGI
YSSSQYLDQANDKEIDSWERLDVGTRYAFKLDEKTITLRANVENVLDKRYWSSAGASDDS
EPGLTLSTPRTYLLSATIDF
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagtatttccaggtcgtttgcgtccgttgttgcagttgagccttttgctgagc
ctgagtgccagccccgtgttgatccaatcgagctgggccgacgacggcagtcgccgcagt
tatcaggtgccggccggtagcctgagtgccgcgctgacgcggttcgccggtctcgctggg
gtcaatctttcggtggatccggcgctggtcagcggccgcaacagcagtggattgtccggc
gagttcggtgtggaggaggggttcagccggctgttgctgggctccggtttgcagctgcaa
ccggtcggtgatcaggcttatacgctggtgcccgcagcgcaaggcagcaccttgcaactt
gcgccgacatccattctcggcgcgagcggttcagcggatgccgatgtattcgccggcggt
caggtcgcccgtcgtggttcgcaagggctgttgggctccagggatttcatggaaaccccg
ttcagcatgaccacctacaccagcgaaacagtgaaaaaccaacaggcgcgcaccctcggc
gacttgatcggcagcgacccttcggtacgcgcaaccaacccggccggtggacgctacgag
caattcaccatccgtggtttcagcctgttcaacagtgatgttgcctacaacggcctctac
ggtgtgttgccgacttacaccatcgacatggaaatggccgatcgcgtcgacatcctcaaa
ggcccgagccaattgatcaacgggatttcgccacggggcagtgtaggaggggggatcaac
gtcgtgccgaagcgcgcgaccgacaagccgatcacctcgctgacagccaattacgcatcg
aacaaccaagtcggcggcgcggtggatgtcggacggcgttttggtgacgaaaaccaattc
ggtctgcgcttcaacggggtcaaacagtccggagatacggaatgggatcaccagagcgtc
gatcgcgacatggcggtgctcggtatggactttcgtggtgaacgcttgcgactttccact
gatatcggccacaccgaacgcgacaccgacgcaccgcaggaacgcgtgcaagtcgccgcc
aatgccaaagtgccaaacgccaatgatgtgcgcgataactatgcgcaaccctggagccgg
gcgcgcactaaagacactttcggcacggtcaacggcgagttcgatgtcagcgactcggtc
atgctgtatggcggcgtcggcgcacgcaaaagcaatcatgacttcttgcgccatgccgtt
tcggtgaccaacgatgccggtgatttcagcgtccagccgcgagatttcacccgcgacgaa
aacgttcgtaccgctaccgctggggtgcgcaactggttccagaccgggccggtcagccat
gaagtgaacctggcggccaactacttttatatggacttcgaaaacggcggcgcccgttac
gcggccgggcgcagcaatctctacgatccggtggaaatcgccagacccggcacgccgacc
cgcaatgacgccaaggtctacaccgaaaatcgcttcagcggcgtggcgctgtccgacacg
ctcggcttcttcgacgatcgtctgttgctgactttgggggcgcgctggcagcgagtcaaa
gtcgatgactggagcgacggcatcaagggcgacacggcttacgatgaggaaaaagtctcg
ccatcgggcgggattctgttcaaggcgacggacaaactttcgctgtacgccaactacatg
gaaggtctgagccaaggcaagatcgcgccatcgacatctatcaacgaagacgaaatcttc
ccgccattcatcagccgccagattgaagtcggcgcaaagtacgacgcgggctcatacgcg
ctgacggcagcggtgttccgcatcaaacagcctgcgtacgaaaccaatgcgaccacacga
gtcttcggcccgaacggcaagcgtgagaacaacggcgtagaactgagcatgtttggcgaa
ccgctcaaggggttccgatttctcggcggtgtgatgtacatcgacagcgaactgacccac
accaccaacggcacattcgacggcaaccgcgcaccggcgacaccgaaatacaacgtcaac
ctcggcgcggagtgggacgtgccgactgtgcagggtttgacactgaccagccgtggaatc
tattcgagttcgcagtatctggatcaggcgaacgacaaggaaatcgactcctgggagcgg
ctcgatgtaggcacacgctatgctttcaagctggacgagaagacgatcaccttgcgcgcc
aatgtcgaaaacgtgctggataaacgctattggagctcggcgggtgcttcggatgatagt
gagccgggattgacgctttcgacgccgcgaacgtatctgctgtcggcgacgatagacttc
taa
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