Pseudomonas atacamensis: JWU58_15445
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Entry
JWU58_15445 CDS
T07336
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pata
Pseudomonas atacamensis
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pata03009
]
JWU58_15445
Ribosome biogenesis [BR:
pata03009
]
Prokaryotic type
ribosomal protein modification factors
JWU58_15445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QSL85585
LinkDB
All DBs
Position
complement(3422730..3424934)
Genome browser
AA seq
734 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNIPTENIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQT
GPEFIIEEVDNLDADAQALLMPQSDSQAGTYIAGKDLPLEQTIANMSKILADLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
IANAEFVHYPDEKWFKPGPKDELPSEILDDYTLGIYNRDGELRGSHLYDTNSGNTQRGIC
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
ALPDVPQEVLEKYPSILAGIKGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFSGQAVTEPNNFVEHFIDSSGVVSWRF
FSAKPDFEFVEWDFSGQGENSNAEEAATLFGILEDMGKEVYMAVYEHIGAKACRILVPDY
SEIYPIEDLIWDNTNKALQFRADILNLHNLSKVGLRNLVQGLERSEQDDYTDITTLIGIE
FDDNTPWGKLTILELRLLIYLALQKFDEAKDLVEAFLQYNDNTVERGLFYQAVNVVLEME
LDEDLELEDYEANFRRMFGDERMDAAIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIESYK
KLHAARACVAALSR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcgacttgaagccaagttcgacgacttc
acggtgatcgccgatcagcccattcgctacaagggcgatggctcggcaccggggccgttc
gactacttcctggcgtcgtcggccttgtgcgcggcttacttcgtcaagctgtactgcgac
acgcgcaacatcccgacagagaacattcgcctgtcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgaattgcccgccgatatttcggacaag
gatcgccagggcatcctgcgttccatcgaccgttgcaccgtgaagaaggtggtgcagacc
ggccccgagttcatcatcgaagaagtcgacaacctcgacgccgatgcccaggccttgttg
atgccgcagtccgattcccaggcaggcacctacatcgccggcaaggacctgccgctggaa
cagaccatcgccaacatgtcgaagatccttgccgacctcggcatgaagatcgaaatcgcc
tcgtggcgcaacatcgtgcccaacgtctggtcgctgcacattcgcgatgcgcattcgccg
atgtgcttcaccaacggcaagggcgcgaccaaggaaggcgcactggcgtcggcgctgggc
gagttcatcgagcgcctcaattgcaacttcttctataacgaccagttctggggcgaagac
atcgccaacgccgaattcgtccattatccggacgagaaatggttcaagccgggtccgaaa
gacgaattgcctagcgaaattctcgacgactacaccctcggcatttacaaccgcgacggc
gaactgcgtggctcgcacctgtacgacaccaactccggcaacacccagcgcggcatctgc
tcgctgccgttcgtgcgccagtcggacggtgaagtggtgtacttcccgtccaacctgatc
gaaaacctctacctgagcaacggcatgagcgccggcaacaccctggccgaagcgcaggtg
cagtgcctgtcggaaattttcgagcgcgcagtcaaacgcgaaatcctcgaaggcgaaatg
gccctgccggacgtaccgcaagaggtactggagaaatacccgagcatcctcgccggcatc
aaaggccttgaagagcagggcttcccggtattggtcaaggacgcctcgctgggcggtgaa
ttcccggtgatgtgcgtgaccctgatgaacccgcgcactggcggcgtcttcgcctcgttc
ggcgcgcacccgagcctggaagtcgcgctggaacgcagcctgactgaactgcttcagggc
cgcagctttgaaggcctcaacgacttgccgcagccgacgttctcggggcaggcagtcacc
gaaccgaacaacttcgtcgagcacttcatcgattccagcggtgtggtgtcgtggcgcttc
ttcagtgccaagccagacttcgaattcgtcgagtgggacttctcaggccaaggcgaaaac
tccaatgccgaagaagccgcgaccctgttcggcatcctcgaagacatgggcaaggaagtc
tacatggcggtctacgagcacatcggcgccaaggcctgccgcatcctcgtgccggattac
tcggaaatctacccgatcgaagacctgatctgggacaacaccaacaaagccctgcaattc
cgcgccgacatcctcaatctgcacaacctcagtaaggttggcctgcgcaatctggtccaa
ggcctggaacgcagcgagcaggacgactacaccgatatcaccacgctgatcggcatcgag
ttcgatgacaacacaccatggggcaagctgacgattctggaactgcgcctgctgatctac
ctcgcgctgcagaagtttgacgaggccaaggatctggttgaggcgttcctgcaatacaac
gacaacaccgttgagcgcggcttgttctatcaggctgtgaatgtggtgctggagatggag
ctggacgaggatctcgagctggaagactacgaggccaacttccgtcggatgtttggtgac
gagcgtatggatgcggcgattgggtcggtcaatggcagcgtgcggttctatggcctgaca
ccgacgagcatgaagctggaagggctggatcggcatttgcgcttgatcgagagctataaa
aaactgcatgcggcgcgcgcttgtgtggcggcgttgtcgcgctga
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